BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037485
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
emb|CBI32639.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_003594404.1| Pentatricopeptide repeat-containing protein ...   105   3e-21

>ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|222853155|gb|EEE90702.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  119 bits (299), Expect = 2e-25
 Identities = 55/99 (55%), Positives = 75/99 (75%)
 Frame = -1

Query: 298 VKVFEEMKYKDAITWNTMISGLVKFGMGGYAVRVFKAMREERVEFSGFILCSVLKACAVM 119
           VKVFEEM+++D +TWN ++S  ++ G+   A+ VF+AMR E VE + F LCSVLKACA +
Sbjct: 147 VKVFEEMEFRDVVTWNALVSSFLRHGLAKEALGVFRAMRRESVEITEFTLCSVLKACAFI 206

Query: 118 KSLKHGKEIHALVIVMGCDLLVLSTALIDLYSDCGIMDE 2
           K+ + GK++H LVIVMG DL+VL TALID YS+ G + E
Sbjct: 207 KAFRQGKQVHGLVIVMGRDLVVLGTALIDFYSNVGYISE 245


>ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Cucumis sativus]
           gi|449529896|ref|XP_004171934.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Cucumis sativus]
          Length = 544

 Score =  110 bits (275), Expect = 1e-22
 Identities = 49/99 (49%), Positives = 72/99 (72%)
 Frame = -1

Query: 298 VKVFEEMKYKDAITWNTMISGLVKFGMGGYAVRVFKAMREERVEFSGFILCSVLKACAVM 119
           VKVFEEM+ +D + WN+++S  ++ G+   A+ VF+ M+ E+VEFS F LCSVLKACA +
Sbjct: 147 VKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAAL 206

Query: 118 KSLKHGKEIHALVIVMGCDLLVLSTALIDLYSDCGIMDE 2
           +  + GK++H +V+VM  D+LVL TAL+D YS  G + E
Sbjct: 207 EDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISE 245


>emb|CBI32639.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/99 (51%), Positives = 73/99 (73%)
 Frame = -1

Query: 298 VKVFEEMKYKDAITWNTMISGLVKFGMGGYAVRVFKAMREERVEFSGFILCSVLKACAVM 119
           V+VFEE+ +KD +TWNTM+S  V+ G    A+ VF+ M++E V  S F LCS+LKAC ++
Sbjct: 56  VRVFEEVGFKDVVTWNTMLSSFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLL 115

Query: 118 KSLKHGKEIHALVIVMGCDLLVLSTALIDLYSDCGIMDE 2
           K+ + GK++HALV+VMG DL+VL TALID Y++   + E
Sbjct: 116 KAFQQGKQVHALVVVMGRDLVVLGTALIDFYTNVECIGE 154


>ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 498

 Score =  108 bits (270), Expect = 5e-22
 Identities = 51/99 (51%), Positives = 73/99 (73%)
 Frame = -1

Query: 298 VKVFEEMKYKDAITWNTMISGLVKFGMGGYAVRVFKAMREERVEFSGFILCSVLKACAVM 119
           V+VFEE+ +KD +TWNTM+S  V+ G    A+ VF+ M++E V  S F LCS+LKAC ++
Sbjct: 95  VRVFEEVGFKDVVTWNTMLSSFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLL 154

Query: 118 KSLKHGKEIHALVIVMGCDLLVLSTALIDLYSDCGIMDE 2
           K+ + GK++HALV+VMG DL+VL TALID Y++   + E
Sbjct: 155 KAFQQGKQVHALVVVMGRDLVVLGTALIDFYTNVECIGE 193


>ref|XP_003594404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483452|gb|AES64655.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 516

 Score =  105 bits (263), Expect = 3e-21
 Identities = 49/95 (51%), Positives = 68/95 (71%)
 Frame = -1

Query: 298 VKVFEEMKYKDAITWNTMISGLVKFGMGGYAVRVFKAMREERVEFSGFILCSVLKACAVM 119
           +KVF+EM ++D + WNT++S  ++ G    A+RV + M  E VE S F LCSVLK CA +
Sbjct: 113 LKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASL 172

Query: 118 KSLKHGKEIHALVIVMGCDLLVLSTALIDLYSDCG 14
           K+L+ G+++H LV+ MG DL+VLSTALID YS  G
Sbjct: 173 KALEFGRQVHGLVVAMGRDLVVLSTALIDFYSSVG 207