BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037340
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_588321.1| hypothetical protein ZeamMp058 [Zea mays subsp....    70   4e-10
ref|XP_002535311.1| conserved hypothetical protein [Ricinus comm...    49   9e-10
ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula] g...    64   2e-08
ref|XP_002531802.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|YP_588321.1| hypothetical protein ZeamMp058 [Zea mays subsp. mays]
           gi|40795110|gb|AAR91154.1| hypothetical protein
           (mitochondrion) [Zea mays] gi|413954039|gb|AFW86688.1|
           putative uncharacterized protein orf109-a [Zea mays]
           gi|413954253|gb|AFW86902.1| putative uncharacterized
           protein orf109-a [Zea mays] gi|414888179|tpg|DAA64193.1|
           TPA: putative uncharacterized protein orf109-a [Zea
           mays]
          Length = 109

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 36/56 (64%), Positives = 41/56 (73%)
 Frame = -1

Query: 178 ISITHRRLVRTEGQCPP*PKWAYQRSNCLFLLRFAFVQRPRSRKRQLSFERKRSHP 11
           +SITH RLVRTEGQCPP  + A+QRSNC  + RFAFVQ PR   R+LSF  KR  P
Sbjct: 1   MSITHLRLVRTEGQCPP--RRAHQRSNCYLIGRFAFVQGPRCWNRRLSFSSKRPTP 54


>ref|XP_002535311.1| conserved hypothetical protein [Ricinus communis]
           gi|223523476|gb|EEF27072.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 63

 Score = 48.5 bits (114), Expect(2) = 9e-10
 Identities = 23/30 (76%), Positives = 26/30 (86%), Gaps = 2/30 (6%)
 Frame = -2

Query: 321 LRWSS--LIFPNVQSCSGLRKEHRPSALNE 238
           +RWSS  + FPNV+SCSGLRKEHRPS LNE
Sbjct: 34  VRWSSRSVGFPNVKSCSGLRKEHRPSTLNE 63



 Score = 40.0 bits (92), Expect(2) = 9e-10
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -1

Query: 424 MLLPADQAATLLVIGVSGKPLTFGSDK*SPLGRFAQM 314
           MLLPA  AA      +S KPL+FGSDK SP GRFAQ+
Sbjct: 1   MLLPASDAAR---DRLSFKPLSFGSDKSSPFGRFAQV 34


>ref|XP_003588306.1| Ribosomal protein S3 [Medicago truncatula]
           gi|355477354|gb|AES58557.1| Ribosomal protein S3
           [Medicago truncatula]
          Length = 306

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 30/34 (88%), Positives = 30/34 (88%)
 Frame = +1

Query: 433 MGQRIKRFDFVPRDPPQVGFASRVMGYYPARFGE 534
           MGQRIKRFDFV RD PQVGF SRVMG YPARFGE
Sbjct: 1   MGQRIKRFDFVSRDSPQVGFESRVMGDYPARFGE 34


>ref|XP_002531802.1| conserved hypothetical protein [Ricinus communis]
           gi|223528568|gb|EEF30590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 72

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/59 (54%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = -2

Query: 576 LDRGAYIHQRRLQVLPEPCWIVTHHTARKPNLW-WIPGDKVKALDPLPHTWRCSSPPIK 403
           L RG  I Q RL+VL EPC I+T++T           GD VKALDPLPHT + SS PIK
Sbjct: 14  LTRGPSIQQCRLKVLCEPCRIITYYTTHSSQTCDGSQGDNVKALDPLPHTLKGSSTPIK 72