BLASTX nr result

ID: Coptis21_contig00037251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037251
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527998.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_003588620.1| hypothetical protein MTR_1g009230 [Medicago ...    60   2e-07
ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804...    58   9e-07

>ref|XP_002527998.1| conserved hypothetical protein [Ricinus communis]
           gi|223532624|gb|EEF34410.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 436

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/78 (47%), Positives = 50/78 (64%)
 Frame = -1

Query: 236 GATRITHRAQGIVSIASRWHMLATYGTSTNNNTLTTKDLMADANGSPESNCVDDLESSDA 57
           GA RITHRAQGIVSIA+RWHM+    TS ++ +   K L+ + + S ++   DD +  D 
Sbjct: 323 GAARITHRAQGIVSIATRWHMMV---TSASSRSEQGKCLVRETDDSIQT---DDADPPDI 376

Query: 56  FITTPQDTSLFRTRLALV 3
           FIT  QD S F+TR A +
Sbjct: 377 FIT--QDASSFQTRQAFI 392


>ref|XP_003588620.1| hypothetical protein MTR_1g009230 [Medicago truncatula]
           gi|355477668|gb|AES58871.1| hypothetical protein
           MTR_1g009230 [Medicago truncatula]
          Length = 482

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -1

Query: 236 GATRITHRAQGIVSIASRWHMLATYGTSTNNNTLTTKDLMADANGSPESNCVDDLESSDA 57
           GA +ITHRAQGIVSIA+RWHML T   + +      KD M++A  S  S    D +SSD 
Sbjct: 367 GAAKITHRAQGIVSIATRWHMLVTNAFAESEQ---CKDNMSEALASDSS----DSDSSDI 419

Query: 56  FIT-TPQDTSLFRTRLALV 3
            I+  PQ  S F+TR +LV
Sbjct: 420 HISIIPQRLSSFQTRQSLV 438


>ref|XP_002330831.1| predicted protein [Populus trichocarpa] gi|222872633|gb|EEF09764.1|
           predicted protein [Populus trichocarpa]
          Length = 409

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/80 (47%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = -1

Query: 236 GATRITHRAQGIVSIASRWHMLATYGTSTNNNTLTTKDLMADANGSPESNCVD-DLESSD 60
           GA RITHRAQGIVS+A+RWHM+     S +      K  + +A+G+  SN  D + +SSD
Sbjct: 287 GAARITHRAQGIVSMATRWHMIVA-SASASARIDQGKSHVPEADGTLASNTEDSESDSSD 345

Query: 59  AFIT-TPQDTSLFRTRLALV 3
            FI  + QD   F+TR ALV
Sbjct: 346 NFIAISSQDPCSFQTRQALV 365


>ref|XP_003527815.1| PREDICTED: uncharacterized protein LOC100804399 [Glycine max]
          Length = 437

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/78 (43%), Positives = 48/78 (61%)
 Frame = -1

Query: 236 GATRITHRAQGIVSIASRWHMLATYGTSTNNNTLTTKDLMADANGSPESNCVDDLESSDA 57
           GA RITHRAQGIVSIA++WHM+ T  ++ + +    K  M +   SP ++   D +SSD 
Sbjct: 324 GAARITHRAQGIVSIATKWHMVVTNASAESEH---WKTQMPEGLPSPTAS---DSDSSDI 377

Query: 56  FITTPQDTSLFRTRLALV 3
           +I+       F+TR ALV
Sbjct: 378 YISVTTQGPSFQTRQALV 395


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