BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037242
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    65   4e-09
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    63   2e-08
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    63   3e-08
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              61   1e-07
gb|AAX95129.1| retrotransposon protein, putative, unclassified [...    60   1e-07

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
 Frame = -1

Query: 462 IYAWNCRGIGSTTVIQYLKDQMGYLEVDVVCLSETKADEKQIEVVSKKLKLGGRFCVPAE 283
           I +WNCRG+GS + +  L+  +      +V LSETK    ++E V KKLK      V  E
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 282 GLC----GGLAVMWKENVDLEVIGATKNQVTGKQVMQVRGVW 169
           G C    GGLA++W+  + ++V+  + N +      + +G W
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEW 105


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/90 (28%), Positives = 48/90 (53%)
 Frame = -1

Query: 468 MTIYAWNCRGIGSTTVIQYLKDQMGYLEVDVVCLSETKADEKQIEVVSKKLKLGGRFCVP 289
           M I  WNCRG+G+   ++ L+    +   D++ LSET  ++ + E +  +L     F V 
Sbjct: 1   MNILCWNCRGVGNPRTVRQLRKWSTFYAPDIMFLSETMINKTESEALKSRLGFANAFGVS 60

Query: 288 AEGLCGGLAVMWKENVDLEVIGATKNQVTG 199
           + G  GGL V W+E +   ++  +++ + G
Sbjct: 61  SRGRAGGLCVFWREELSFSLVSFSQHHICG 90


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/104 (31%), Positives = 56/104 (53%)
 Frame = -1

Query: 468 MTIYAWNCRGIGSTTVIQYLKDQMGYLEVDVVCLSETKADEKQIEVVSKKLKLGGRFCVP 289
           M I +WNC+G+G+T  +++L++  G    +V+ L ETK     +E V   L       V 
Sbjct: 1   MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60

Query: 288 AEGLCGGLAVMWKENVDLEVIGATKNQVTGKQVMQVRGVWLGMI 157
             G  GGLA+MWK++V ++V+ + K  +    + Q +  +L  I
Sbjct: 61  PIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFYLTCI 104


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -1

Query: 492 PFTVTFVPMTIYAWNCRGIGSTTVIQYLKDQMGYLEVDVVCLSETKAD--EKQIEVVSKK 319
           PF   F+ M I +WNCRGI ++ V +++KD +   + D +CL E ++   EK I + S +
Sbjct: 526 PFRGCFL-MRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALAS-R 583

Query: 318 LKLGGRFCVPAEGLCGGLAVMWKENVDLEVI 226
           L L   F V   G  GGL ++WK  ++L VI
Sbjct: 584 LGLTNHFIVNPLGFAGGLLLLWKPALNLSVI 614


>gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group] gi|62733115|gb|AAX95232.1|
           retrotransposon protein, putative, unclassified [Oryza
           sativa Japonica Group]
          Length = 1324

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/107 (30%), Positives = 52/107 (48%)
 Frame = -1

Query: 489 FTVTFVPMTIYAWNCRGIGSTTVIQYLKDQMGYLEVDVVCLSETKADEKQIEVVSKKLKL 310
           F +   PM I AWNCRG+G+   ++ L +     + D++ LS TK D  +++    KL +
Sbjct: 441 FCINKYPMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGM 500

Query: 309 GGRFCVPAEGLCGGLAVMWKENVDLEVIGATKNQVTGKQVMQVRGVW 169
                   +G  GGLAV WK+ ++L  +           VM+  G W
Sbjct: 501 PNLVVKDCQGKSGGLAVFWKKEINLR-LRTVSRLFMDVDVMEDDGFW 546