BLASTX nr result

ID: Coptis21_contig00037191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037191
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530969.1| PREDICTED: ABC transporter G family member 1...   218   5e-55
ref|XP_003525183.1| PREDICTED: ABC transporter G family member 1...   218   5e-55
ref|XP_003576511.1| PREDICTED: ABC transporter G family member 1...   208   3e-52
ref|XP_002318509.1| white-brown-complex ABC transporter family [...   207   5e-52
ref|XP_003631132.1| ABC transporter G family member [Medicago tr...   207   5e-52

>ref|XP_003530969.1| PREDICTED: ABC transporter G family member 18-like [Glycine max]
          Length = 794

 Score =  218 bits (554), Expect = 5e-55
 Identities = 114/143 (79%), Positives = 121/143 (84%)
 Frame = -3

Query: 433 SLEGSVSVDGTPVTTSYMKKVSSYVMQDDQLFPMLTVFETLLFAAEVRLPPTISRAEKKR 254
           SLEGSV +DG PVTTSYMK VSSYVMQDDQLFPMLTVFET +FAAEVRLPP+ISR+EKK+
Sbjct: 108 SLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRSEKKK 167

Query: 253 RVYELLEQLGLQSATHTYIGDXXXXXXXXXXXXXXXXXIDIIHKPSVLFLDEPTSGLDST 74
           RVYELL+QLGLQSATHTYIGD                 IDIIHKPS+LFLDEPTSGLDST
Sbjct: 168 RVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDST 227

Query: 73  SAYSVVEKVKDIARSGSIVLMTI 5
           SAYSVVEKVKDIAR GSIVLMTI
Sbjct: 228 SAYSVVEKVKDIARGGSIVLMTI 250


>ref|XP_003525183.1| PREDICTED: ABC transporter G family member 18-like [Glycine max]
          Length = 799

 Score =  218 bits (554), Expect = 5e-55
 Identities = 114/143 (79%), Positives = 121/143 (84%)
 Frame = -3

Query: 433 SLEGSVSVDGTPVTTSYMKKVSSYVMQDDQLFPMLTVFETLLFAAEVRLPPTISRAEKKR 254
           SLEGSV +DG PVTTSYMK VSSYVMQDDQLFPMLTVFET +FAAEVRLPP+ISR+EKK+
Sbjct: 107 SLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRSEKKK 166

Query: 253 RVYELLEQLGLQSATHTYIGDXXXXXXXXXXXXXXXXXIDIIHKPSVLFLDEPTSGLDST 74
           RVYELL+QLGLQSATHTYIGD                 IDIIHKPS+LFLDEPTSGLDST
Sbjct: 167 RVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDST 226

Query: 73  SAYSVVEKVKDIARSGSIVLMTI 5
           SAYSVVEKVKDIAR GSIVLMTI
Sbjct: 227 SAYSVVEKVKDIARGGSIVLMTI 249


>ref|XP_003576511.1| PREDICTED: ABC transporter G family member 18-like, partial
           [Brachypodium distachyon]
          Length = 725

 Score =  208 bits (530), Expect = 3e-52
 Identities = 107/143 (74%), Positives = 118/143 (82%)
 Frame = -3

Query: 433 SLEGSVSVDGTPVTTSYMKKVSSYVMQDDQLFPMLTVFETLLFAAEVRLPPTISRAEKKR 254
           SLEGSVS+DG PVTTSYMK++SSYVMQDDQLFPMLTV ETL FAAEVRLPP++SRAEK +
Sbjct: 35  SLEGSVSIDGRPVTTSYMKQISSYVMQDDQLFPMLTVLETLTFAAEVRLPPSLSRAEKLK 94

Query: 253 RVYELLEQLGLQSATHTYIGDXXXXXXXXXXXXXXXXXIDIIHKPSVLFLDEPTSGLDST 74
           RV+EL+EQLGLQ+  HTYIGD                  DIIHKPS+LFLDEPTSGLDST
Sbjct: 95  RVWELIEQLGLQTTAHTYIGDEGIRGVSGGERRRVSIGTDIIHKPSLLFLDEPTSGLDST 154

Query: 73  SAYSVVEKVKDIARSGSIVLMTI 5
           SAYSVVEKVKDIA+ GSIVLMTI
Sbjct: 155 SAYSVVEKVKDIAKGGSIVLMTI 177


>ref|XP_002318509.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859182|gb|EEE96729.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 812

 Score =  207 bits (528), Expect = 5e-52
 Identities = 108/143 (75%), Positives = 118/143 (82%)
 Frame = -3

Query: 433 SLEGSVSVDGTPVTTSYMKKVSSYVMQDDQLFPMLTVFETLLFAAEVRLPPTISRAEKKR 254
           SL+GSV +DG PVTTSYMK +SSYVMQDDQLFPMLTVFET +FAAEVRLPP++SRAEKK+
Sbjct: 108 SLQGSVRIDGKPVTTSYMKMISSYVMQDDQLFPMLTVFETFMFAAEVRLPPSVSRAEKKK 167

Query: 253 RVYELLEQLGLQSATHTYIGDXXXXXXXXXXXXXXXXXIDIIHKPSVLFLDEPTSGLDST 74
           RV ELL QLGL SATHTYIG+                 IDIIHKPS+LFLDEPTSGLDST
Sbjct: 168 RVDELLHQLGLTSATHTYIGNEGNRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDST 227

Query: 73  SAYSVVEKVKDIARSGSIVLMTI 5
           SAYSVVEKVKDIAR GSI+LMTI
Sbjct: 228 SAYSVVEKVKDIARGGSIILMTI 250


>ref|XP_003631132.1| ABC transporter G family member [Medicago truncatula]
           gi|258518201|gb|ACV73541.1| STR [Medicago truncatula]
           gi|258518203|gb|ACV73542.1| STR [Medicago truncatula]
           gi|355525154|gb|AET05608.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 817

 Score =  207 bits (528), Expect = 5e-52
 Identities = 108/143 (75%), Positives = 119/143 (83%)
 Frame = -3

Query: 433 SLEGSVSVDGTPVTTSYMKKVSSYVMQDDQLFPMLTVFETLLFAAEVRLPPTISRAEKKR 254
           SL+GSV +DG PVTTSYMK VSSYVMQDDQLFPMLTVFET +FAAEVRLPP+ISR EKK+
Sbjct: 108 SLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKK 167

Query: 253 RVYELLEQLGLQSATHTYIGDXXXXXXXXXXXXXXXXXIDIIHKPSVLFLDEPTSGLDST 74
           RV+ELL +LGLQSATHTYIGD                 I+IIHKPS+LFLDEPTSGLDST
Sbjct: 168 RVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDST 227

Query: 73  SAYSVVEKVKDIARSGSIVLMTI 5
           SAYSVVEK+KDIA+ GSIVLMTI
Sbjct: 228 SAYSVVEKIKDIAQGGSIVLMTI 250


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