BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037141
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320353.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_003625900.1| Pentatricopeptide repeat-containing protein ...   128   6e-28
ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>ref|XP_002320353.1| predicted protein [Populus trichocarpa] gi|222861126|gb|EEE98668.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   WFSIMEVEGVTPDEVTLVGVLSACSHSGMVQTGRDIFQSMMDGKYGFRPNTKHYACMIDI 181
           WF+ ME EG   DEVTL  VL+AC HSG+V  GR IF S+++G YGF P+ KHYACMID+
Sbjct: 199 WFNRMEEEGFEADEVTLANVLNACIHSGLVDMGRQIFSSLINGNYGFSPSLKHYACMIDL 258

Query: 182 LARAGCLDEAVKLIETMPFEPSKTMWG 262
           L RAGCLDEA KLI+ MPFEPSK++WG
Sbjct: 259 LTRAGCLDEAFKLIKEMPFEPSKSIWG 285


>ref|XP_003625900.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355500915|gb|AES82118.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 467

 Score =  128 bits (321), Expect = 6e-28
 Identities = 58/87 (66%), Positives = 70/87 (80%)
 Frame = +2

Query: 2   WFSIMEVEGVTPDEVTLVGVLSACSHSGMVQTGRDIFQSMMDGKYGFRPNTKHYACMIDI 181
           WF+ ME++GV  DEVTLV VLSACSHSG+V+ GR IF  ++DGKYGF PN KHYACM+D+
Sbjct: 298 WFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDL 357

Query: 182 LARAGCLDEAVKLIETMPFEPSKTMWG 262
           LARAG L EA  +I+ MPFEP+  MWG
Sbjct: 358 LARAGQLQEAFDIIKCMPFEPTAAMWG 384


>ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 468

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/87 (65%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   WFSIMEVEGVTPDEVTLVGVLSACSHSGMVQTGRDIFQSMMDGKYGFRPNTKHYACMIDI 181
           WF  ME EG+  DEVTL+ VL ACSHSGMVQ GR IF S+M+GKY F P  KHYAC+ID+
Sbjct: 298 WFYRMEQEGIKADEVTLIAVLCACSHSGMVQMGRQIFGSLMNGKYEFFPGVKHYACVIDL 357

Query: 182 LARAGCLDEAVKLIETMPFEPSKTMWG 262
           LARAG L EA++++  MPFEP+K MWG
Sbjct: 358 LARAGILQEAMEVMTRMPFEPNKVMWG 384


>ref|XP_004136175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  120 bits (302), Expect = 9e-26
 Identities = 52/87 (59%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   WFSIMEVEGVTPDEVTLVGVLSACSHSGMVQTGRDIFQSMMDGKYGFRPNTKHYACMIDI 181
           WF  M+ EGV  D+VTLV VLSACSHSG+V +GR IF S++ G++GF P  KHY+CM+DI
Sbjct: 299 WFKRMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDI 358

Query: 182 LARAGCLDEAVKLIETMPFEPSKTMWG 262
           LAR GC++EA  +I+ MPFE +++MWG
Sbjct: 359 LARNGCIEEACVMIKDMPFEATRSMWG 385


>ref|XP_004160564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Cucumis sativus]
          Length = 464

 Score =  120 bits (301), Expect = 1e-25
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = +2

Query: 2   WFSIMEVEGVTPDEVTLVGVLSACSHSGMVQTGRDIFQSMMDGKYGFRPNTKHYACMIDI 181
           WF  M+ EGV  D+VTLV VLSACSHSG+V +GR IF S++ G++GF P  KHY+CM+DI
Sbjct: 299 WFKRMDEEGVEADDVTLVAVLSACSHSGLVNSGRQIFWSLIHGRFGFSPGIKHYSCMVDI 358

Query: 182 LARAGCLDEAVKLIETMPFEPSKTMWG 262
           LAR GC++EA  +I  MPFE +++MWG
Sbjct: 359 LARNGCIEEACVMINDMPFEATRSMWG 385