BLASTX nr result

ID: Coptis21_contig00037124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037124
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244...    71   8e-11
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...    65   4e-09
ref|XP_002334623.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002336092.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|AAF23837.1|AC007234_9 F1E22.14 [Arabidopsis thaliana]               61   8e-08

>ref|XP_002266964.2| PREDICTED: uncharacterized protein LOC100244982 [Vitis vinifera]
          Length = 1076

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 9/85 (10%)
 Frame = -1

Query: 256 ALSDVRPMCVDDLNRPPRCY-VSGLVVRGV-DDDSP----NMLQILTSKPISFKERKENG 95
           AL+DVRP C+ DLNRP   Y V+ +V + V D D P    +   +L+SKPI F++  E  
Sbjct: 150 ALTDVRPKCISDLNRPKISYTVASVVAKPVRDPDEPPPEEDTCIVLSSKPIEFEQNMETN 209

Query: 94  E---TLFATFLINITTNNRIWRALH 29
           +   TLFA FLIN+ TNNRIW AL+
Sbjct: 210 KKRKTLFAVFLINMITNNRIWAALN 234


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/96 (44%), Positives = 55/96 (57%), Gaps = 13/96 (13%)
 Frame = -1

Query: 256 ALSDVRPMCVDDLNRPPRCYVSGLVVRGVDDDSPNMLQILTSKPISFKERK--------- 104
           A +DVRP  + DL+RP R YV  LV +G   ++ N L IL+SK I   E++         
Sbjct: 105 AFTDVRPKSISDLDRPKRPYVIALV-QGPLGETSNKLPILSSKLIECFEQRMAMDHKRET 163

Query: 103 ---ENGETLFATFLINITTNNRIWRALH-GENEHNM 8
              +  ETLFA FL N+TTN RIW ALH G+   NM
Sbjct: 164 EADKKKETLFAVFLTNMTTNIRIWTALHLGQERGNM 199


>ref|XP_002334623.1| predicted protein [Populus trichocarpa] gi|222873723|gb|EEF10854.1|
           predicted protein [Populus trichocarpa]
          Length = 454

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 20/105 (19%)
 Frame = -1

Query: 256 ALSDVRPMCVDDLNRPP----RCYVSGLVVRGVDDDSPNMLQILTSKPISFK-------- 113
           AL+DVRP  + DLNRP       YV GL +   D+D  ++L ILTSKPI F+        
Sbjct: 127 ALTDVRPKDIGDLNRPGFNYLLAYVHGLSLAKDDNDKYDILSILTSKPIQFELEDREIKK 186

Query: 112 --------ERKENGETLFATFLINITTNNRIWRALHGENEHNMIK 2
                    RK     +F  +L+N+ TN RIWR+L+ + E   +K
Sbjct: 187 ESVIAGKGRRKNMIANVFVVYLVNMMTNIRIWRSLNSDLEGGNMK 231



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/80 (46%), Positives = 49/80 (61%)
 Frame = -1

Query: 256 ALSDVRPMCVDDLNRPPRCYVSGLVVRGVDDDSPNMLQILTSKPISFKERKENGETLFAT 77
           AL++V+  C+DDL +  + Y    V   V   +     IL+SKPI  +E  +NG TLFA 
Sbjct: 332 ALTNVKLKCIDDLRKTQQSYHVAFV-HAVKRGNRLTASILSSKPIVDEEGLKNG-TLFAV 389

Query: 76  FLINITTNNRIWRALHGENE 17
            LIN+TTN RIWR+LH E E
Sbjct: 390 RLINLTTNLRIWRSLHLELE 409


>ref|XP_002336092.1| predicted protein [Populus trichocarpa] gi|222872079|gb|EEF09210.1|
           predicted protein [Populus trichocarpa]
          Length = 1079

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/105 (38%), Positives = 55/105 (52%), Gaps = 20/105 (19%)
 Frame = -1

Query: 256 ALSDVRPMCVDDLNRPP----RCYVSGLVVRGVDDDSPNMLQILTSKPISFK-------- 113
           AL+DVRP  + DLNRP       YV GL +   D+D  ++L ILTSKPI F+        
Sbjct: 97  ALTDVRPKDIGDLNRPGFNYLLAYVHGLSLAKDDNDKYDILSILTSKPIQFELEDREIKK 156

Query: 112 --------ERKENGETLFATFLINITTNNRIWRALHGENEHNMIK 2
                    RK     +F  +L+N+ TN RIWR+L+ + E   +K
Sbjct: 157 ESVIAGKGRRKNMIANVFVVYLVNMMTNIRIWRSLNSDLEGGNMK 201


>gb|AAF23837.1|AC007234_9 F1E22.14 [Arabidopsis thaliana]
          Length = 1076

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
 Frame = -1

Query: 256 ALSDVRPMCVDDLNRPPRCYVSGLVVRGVDDDSPNMLQILTSKPISFKE----RKENGET 89
           +L+D RP  VD  N     Y+  LV + VD D PN + IL SKP+  ++    + E  E 
Sbjct: 116 SLTDQRPNHVDGFNISSEPYIVALVCK-VDPDRPNDVTILASKPLFVEDGRRKKNEKKER 174

Query: 88  LFATFLINITTNNRIWRALHGENE 17
           LF   L+N+TTN RIW ALH  +E
Sbjct: 175 LFGIHLVNLTTNIRIWNALHPGDE 198


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