BLASTX nr result

ID: Coptis21_contig00037067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037067
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34820.3| unnamed protein product [Vitis vinifera]              129   4e-28
ref|XP_002266596.1| PREDICTED: uncharacterized protein At4g22758...   129   4e-28
ref|XP_002509626.1| conserved hypothetical protein [Ricinus comm...   116   3e-24
ref|XP_002303538.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204...   107   1e-21

>emb|CBI34820.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  129 bits (324), Expect = 4e-28
 Identities = 66/103 (64%), Positives = 77/103 (74%)
 Frame = +3

Query: 207 NVTIQRSLGAVQVVISPEKKVEDLIRVVLEIYVKEKRRPLLNTTDARCFELHYSQFTLES 386
           NVTIQ S G +QVV SPE  V DLI+  L IYVKEKRRPL+  T+  CFELHYSQF+LES
Sbjct: 71  NVTIQHSFGPIQVVTSPENTVGDLIKEALAIYVKEKRRPLVKQTNPECFELHYSQFSLES 130

Query: 387 LDRKEKLINLGSRNFFLFPKSTENLNSSCSDQAIREVAFTKFM 515
           L   EKLINLGSRNFFL  K  ++L+SSC ++A+    FTKFM
Sbjct: 131 LKTGEKLINLGSRNFFLCQKPAKSLDSSCYEEAMSLFPFTKFM 173


>ref|XP_002266596.1| PREDICTED: uncharacterized protein At4g22758 [Vitis vinifera]
          Length = 172

 Score =  129 bits (324), Expect = 4e-28
 Identities = 66/103 (64%), Positives = 77/103 (74%)
 Frame = +3

Query: 207 NVTIQRSLGAVQVVISPEKKVEDLIRVVLEIYVKEKRRPLLNTTDARCFELHYSQFTLES 386
           NVTIQ S G +QVV SPE  V DLI+  L IYVKEKRRPL+  T+  CFELHYSQF+LES
Sbjct: 66  NVTIQHSFGPIQVVTSPENTVGDLIKEALAIYVKEKRRPLVKQTNPECFELHYSQFSLES 125

Query: 387 LDRKEKLINLGSRNFFLFPKSTENLNSSCSDQAIREVAFTKFM 515
           L   EKLINLGSRNFFL  K  ++L+SSC ++A+    FTKFM
Sbjct: 126 LKTGEKLINLGSRNFFLCQKPAKSLDSSCYEEAMSLFPFTKFM 168


>ref|XP_002509626.1| conserved hypothetical protein [Ricinus communis]
           gi|223549525|gb|EEF51013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 184

 Score =  116 bits (291), Expect = 3e-24
 Identities = 59/93 (63%), Positives = 73/93 (78%)
 Frame = +3

Query: 207 NVTIQRSLGAVQVVISPEKKVEDLIRVVLEIYVKEKRRPLLNTTDARCFELHYSQFTLES 386
           NV I+RSLG VQV+++PE  V DLI+  +EIYVKEKRRPLL   +  CF+LHYSQF+LES
Sbjct: 75  NVNIERSLGPVQVIMAPENTVGDLIKAAIEIYVKEKRRPLLKYANPDCFQLHYSQFSLES 134

Query: 387 LDRKEKLINLGSRNFFLFPKSTENLNSSCSDQA 485
           L   EKLINLGSRNFFL   S+ ++NSSC ++A
Sbjct: 135 LKPDEKLINLGSRNFFLC-SSSNSINSSCLEKA 166


>ref|XP_002303538.1| predicted protein [Populus trichocarpa] gi|222840970|gb|EEE78517.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/91 (61%), Positives = 70/91 (76%)
 Frame = +3

Query: 207 NVTIQRSLGAVQVVISPEKKVEDLIRVVLEIYVKEKRRPLLNTTDARCFELHYSQFTLES 386
           NV I+RSLG V V++SPE  V+DL++  ++IYVKE+RRPLL   D   FELHYSQF+LES
Sbjct: 7   NVNIERSLGPVHVILSPENTVKDLVKSAIDIYVKERRRPLLEQIDPDRFELHYSQFSLES 66

Query: 387 LDRKEKLINLGSRNFFLFPKSTENLNSSCSD 479
           L   EKLINLGSRNFFL  K +  +NSSC++
Sbjct: 67  LKPDEKLINLGSRNFFLCSKPSNAVNSSCTE 97


>ref|XP_004145782.1| PREDICTED: uncharacterized protein LOC101204625 [Cucumis sativus]
           gi|449496238|ref|XP_004160081.1| PREDICTED:
           uncharacterized LOC101204625 [Cucumis sativus]
          Length = 187

 Score =  107 bits (268), Expect = 1e-21
 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
 Frame = +3

Query: 207 NVTIQRSLGAVQVVISPEKKVEDLIRVVLEIYVKEKRRPLLNTTDARCFELHYSQFTLES 386
           NVTIQ SLG VQV++SPE  V DL+   +  Y+KE RRP+L T D   F+LHYSQF+LES
Sbjct: 67  NVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYSQFSLES 126

Query: 387 LDRKEKLINLGSRNFFLFPKSTENLN--------SSCSDQA 485
           L+++EKLI LGSRNFFL PK +++ N        SSCS +A
Sbjct: 127 LNKEEKLIALGSRNFFLCPKKSDDNNDLIASSSSSSCSKEA 167


Top