BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037062
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis] g...   220   1e-55
ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55
ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]       217   7e-55
ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsi...   217   9e-55
ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sat...   215   3e-54

>ref|XP_002534138.1| Protein YIF1A, putative [Ricinus communis]
           gi|223525796|gb|EEF28242.1| Protein YIF1A, putative
           [Ricinus communis]
          Length = 269

 Score =  220 bits (560), Expect = 1e-55
 Identities = 111/158 (70%), Positives = 122/158 (77%), Gaps = 5/158 (3%)
 Frame = +2

Query: 59  MYENLGRQPPIYQQGVGPPVYEQGVRPSIYHQPYPSKNAFSGAGVGL-----GAYGERIL 223
           MY N+G QP       G P      RP    QP P  NAF GAG GL     GAYGE+IL
Sbjct: 1   MYNNVGTQP-------GVP------RPPTNPQPNPFGNAFYGAGSGLIRGGLGAYGEKIL 47

Query: 224 GSSTEYVQSNVSKYFSDPQYYFQVNGQYVRKKLKVILFPFLHRGHWTRVTEPVGGRLSYK 403
           GSS+EYVQSN+S+YFSDPQYYFQVN QYVR KLKV+LFPFLHRGHWTR+TEPVGGRLSYK
Sbjct: 48  GSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYK 107

Query: 404 PPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPE 517
           PP +DINAPDLYIP M+FGTY+VLAG +LGL GKFSPE
Sbjct: 108 PPIYDINAPDLYIPFMAFGTYIVLAGLSLGLNGKFSPE 145


>ref|XP_002310429.1| predicted protein [Populus trichocarpa] gi|222853332|gb|EEE90879.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  219 bits (559), Expect = 1e-55
 Identities = 112/159 (70%), Positives = 122/159 (76%), Gaps = 5/159 (3%)
 Frame = +2

Query: 59  MYENLGRQPPIYQQGVGPPVYEQGVRPSIYHQPYPSKNAFSGAGVGL-----GAYGERIL 223
           MY N+G QP       G P      RP    QP P  NAF GAG GL     GAYGE+IL
Sbjct: 1   MYNNVGPQP-------GVP------RPPTNPQPTPFGNAFYGAGSGLIKGGLGAYGEKIL 47

Query: 224 GSSTEYVQSNVSKYFSDPQYYFQVNGQYVRKKLKVILFPFLHRGHWTRVTEPVGGRLSYK 403
           GSS+EYVQSN+S+YFSDPQYYFQVN  YVR KLKV+LFPFLHRGHWTR+TEPVGGRLSYK
Sbjct: 48  GSSSEYVQSNISRYFSDPQYYFQVNDHYVRNKLKVVLFPFLHRGHWTRITEPVGGRLSYK 107

Query: 404 PPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEA 520
           PP +DINAPDLYIP M+FGTYVVLAG +LGL GKFSPEA
Sbjct: 108 PPIYDINAPDLYIPFMAFGTYVVLAGLSLGLNGKFSPEA 146


>ref|XP_003531903.1| PREDICTED: protein YIF1B-like [Glycine max]
          Length = 273

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/157 (68%), Positives = 126/157 (80%), Gaps = 3/157 (1%)
 Frame = +2

Query: 59  MYENLGRQPPIYQQGVGPPVYEQGVRPSIYHQPYPSKNAFSGAGV---GLGAYGERILGS 229
           MY N+G  P + Q    PP+  Q   P+++   + S    SG+G+   GLGAYGE+ILGS
Sbjct: 1   MYTNIGMPPGVPQHHPQPPMSSQ---PNLFGNAFNS----SGSGLIRGGLGAYGEKILGS 53

Query: 230 STEYVQSNVSKYFSDPQYYFQVNGQYVRKKLKVILFPFLHRGHWTRVTEPVGGRLSYKPP 409
           S+EYVQSN+S+YFSDPQYYFQVN  YV+ KLKV+LFPFLHRGHWTR+TEPVGGRLSYKPP
Sbjct: 54  SSEYVQSNISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPP 113

Query: 410 AFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEA 520
            +DINAPDLYIPLM+FGTYVVLAG +LGL GKFSPEA
Sbjct: 114 IYDINAPDLYIPLMAFGTYVVLAGISLGLRGKFSPEA 150


>ref|NP_564367.1| integral membrane HRF1-like protein [Arabidopsis thaliana]
           gi|145324088|ref|NP_001077633.1| integral membrane
           HRF1-like protein [Arabidopsis thaliana]
           gi|14532658|gb|AAK64057.1| unknown protein [Arabidopsis
           thaliana] gi|21280943|gb|AAM44952.1| unknown protein
           [Arabidopsis thaliana] gi|21554340|gb|AAM63447.1|
           unknown [Arabidopsis thaliana]
           gi|332193168|gb|AEE31289.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
           gi|332193169|gb|AEE31290.1| integral membrane HRF1-like
           protein [Arabidopsis thaliana]
          Length = 269

 Score =  217 bits (552), Expect = 9e-55
 Identities = 110/159 (69%), Positives = 123/159 (77%), Gaps = 5/159 (3%)
 Frame = +2

Query: 59  MYENLGRQPPIYQQGVGPPVYEQGVRPSIYHQPYPSKNAFSGAGVG-----LGAYGERIL 223
           MY N+G QP       G P      RP    +P P  N F+GAG G     LGAYGERIL
Sbjct: 1   MYNNMGPQP-------GMP------RPPGNPEPGPFGNPFTGAGSGFIRGGLGAYGERIL 47

Query: 224 GSSTEYVQSNVSKYFSDPQYYFQVNGQYVRKKLKVILFPFLHRGHWTRVTEPVGGRLSYK 403
           GSS+EYVQSN+S+YFSDPQYYFQVN QYVR KLKV+LFPFLHRGHWTR++EPVGGRLSYK
Sbjct: 48  GSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRISEPVGGRLSYK 107

Query: 404 PPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEA 520
           PP +DINAPDLYIP M+FGTYVVLAG +LGL GKF+PEA
Sbjct: 108 PPIYDINAPDLYIPFMAFGTYVVLAGLSLGLNGKFTPEA 146


>ref|XP_004152088.1| PREDICTED: protein YIF1B-A-like [Cucumis sativus]
           gi|449502274|ref|XP_004161595.1| PREDICTED: protein
           YIF1B-A-like [Cucumis sativus]
          Length = 269

 Score =  215 bits (547), Expect = 3e-54
 Identities = 106/159 (66%), Positives = 120/159 (75%), Gaps = 5/159 (3%)
 Frame = +2

Query: 59  MYENLGRQPPIYQQGVGPPVYEQGVRPSIYHQPYPSKNAFSGAGVGL-----GAYGERIL 223
           MY N+  QP                +P    QP P  NAF GAG GL     GAYGE+I 
Sbjct: 1   MYNNVEAQPA-------------APKPPASSQPNPFGNAFYGAGSGLIRGGLGAYGEKIF 47

Query: 224 GSSTEYVQSNVSKYFSDPQYYFQVNGQYVRKKLKVILFPFLHRGHWTRVTEPVGGRLSYK 403
           GSS+EYVQSN+S+YFSDPQYYFQVN QYVR KLKV+LFPFLHRGHWTR+T+P+GGRLSYK
Sbjct: 48  GSSSEYVQSNISRYFSDPQYYFQVNDQYVRNKLKVVLFPFLHRGHWTRITDPIGGRLSYK 107

Query: 404 PPAFDINAPDLYIPLMSFGTYVVLAGFTLGLIGKFSPEA 520
           PP +DINAPDLYIP M+FGTYVVLAGF+LGL GKF+PEA
Sbjct: 108 PPIYDINAPDLYIPFMAFGTYVVLAGFSLGLQGKFTPEA 146