BLASTX nr result

ID: Coptis21_contig00037036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00037036
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15107.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_002280600.1| PREDICTED: microtubule-associated protein TO...    93   3e-17
emb|CBI32067.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002267941.1| PREDICTED: microtubule-associated protein SP...    90   2e-16
ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>emb|CBI15107.3| unnamed protein product [Vitis vinifera]
          Length = 521

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
 Frame = +1

Query: 1   PTSNNSTRRTAKKGGPMKSTNRISTPLFQKPDYNKNLDWKIEVSVPHTSNFIMDSEDHFK 180
           P  N+S+  T ++ GP+   ++  + +F+K +  K  D K+EV+ PH  + +   ED  K
Sbjct: 220 PQLNSSSATTVRRRGPV---DKSGSAMFRKLERKKASDLKVEVTAPHAPSVMRIHEDGLK 276

Query: 181 ERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKMHKVGGFRPGSRVVLYN 360
           +++EK  E   N+K         ++  KPE R   F KNSD+KM+K GGFR GSRVV   
Sbjct: 277 KKDEKAPERGENEK---------NRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRVVPCQ 327

Query: 361 DECSEST--VSNDSEEHYGNLKETED 432
           +E SE+T  VSN +E  + N KE ED
Sbjct: 328 EENSETTVEVSNTTEVPHRNHKECED 353


>ref|XP_002280600.1| PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Vitis
           vinifera]
          Length = 638

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 57/146 (39%), Positives = 84/146 (57%), Gaps = 2/146 (1%)
 Frame = +1

Query: 1   PTSNNSTRRTAKKGGPMKSTNRISTPLFQKPDYNKNLDWKIEVSVPHTSNFIMDSEDHFK 180
           P  N+S+  T ++ GP+   ++  + +F+K +  K  D K+EV+ PH  + +   ED  K
Sbjct: 337 PQLNSSSATTVRRRGPV---DKSGSAMFRKLERKKASDLKVEVTAPHAPSVMRIHEDGLK 393

Query: 181 ERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKMHKVGGFRPGSRVVLYN 360
           +++EK  E   N+K         ++  KPE R   F KNSD+KM+K GGFR GSRVV   
Sbjct: 394 KKDEKAPERGENEK---------NRFTKPETRRVLFTKNSDDKMNKFGGFRSGSRVVPCQ 444

Query: 361 DECSEST--VSNDSEEHYGNLKETED 432
           +E SE+T  VSN +E  + N KE ED
Sbjct: 445 EENSETTVEVSNTTEVPHRNHKECED 470


>emb|CBI32067.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
 Frame = +1

Query: 1   PTSNNSTRRTAKKGGPMKSTN--RISTPLFQKPDYNKNLDWKIEVSVPHTSNFIMDSEDH 174
           P S+NS   TA+K  P++S+N  + +T +F+K D  K  DWK+EV+VPH S+  +  ED 
Sbjct: 344 PPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDD 403

Query: 175 FKERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKMHKVGGFRPGSRVVL 354
            K R   + + E N    +S         +PE     F+K S+EKMHK G  R GSR+V 
Sbjct: 404 LKRRYLVVSDSEENGNCGDS---------RPETNRVLFSKISNEKMHKFGCLRSGSRIVP 454

Query: 355 YNDECSESTVSNDS----EEHYGNLKETED 432
           +++  +  +   DS    EE Y N K+ ED
Sbjct: 455 FHENNNSESAVVDSNATEEEIYENQKDIED 484


>ref|XP_002267941.1| PREDICTED: microtubule-associated protein SPIRAL2-like [Vitis
           vinifera]
          Length = 654

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 56/150 (37%), Positives = 82/150 (54%), Gaps = 6/150 (4%)
 Frame = +1

Query: 1   PTSNNSTRRTAKKGGPMKSTN--RISTPLFQKPDYNKNLDWKIEVSVPHTSNFIMDSEDH 174
           P S+NS   TA+K  P++S+N  + +T +F+K D  K  DWK+EV+VPH S+  +  ED 
Sbjct: 345 PPSDNSLVTTARKRSPLQSSNNGKSTTAMFRKLDCKKPSDWKVEVAVPHPSSSKVACEDD 404

Query: 175 FKERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKMHKVGGFRPGSRVVL 354
            K R   + + E N    +S         +PE     F+K S+EKMHK G  R GSR+V 
Sbjct: 405 LKRRYLVVSDSEENGNCGDS---------RPETNRVLFSKISNEKMHKFGCLRSGSRIVP 455

Query: 355 YNDECSESTVSNDS----EEHYGNLKETED 432
           +++  +  +   DS    EE Y N K+ ED
Sbjct: 456 FHENNNSESAVVDSNATEEEIYENQKDIED 485


>ref|XP_002318624.1| predicted protein [Populus trichocarpa] gi|222859297|gb|EEE96844.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
 Frame = +1

Query: 1   PTSNNSTRRTAKKGGPMKSTNRISTP-LFQKPDYNKNLDWKIEVSVPHTSNFIMDSEDHF 177
           P  ++    TA+K GP+KST+  + P ++ K D  K +DWK+E+SVP++ +     E+  
Sbjct: 335 PPDSSLIATTARKRGPLKSTDEGTNPAMYGKVDQKKMVDWKVEISVPNSISSTAAGENDL 394

Query: 178 KERNEKIQEPEMNQKVQESEVQKNSQHPKPEDRSNFFNKNSDEKMHKVGGFRPGSRVVLY 357
           K +N K+ E                +  K E + + F+KNSD+K  K GGF+ GSRV   
Sbjct: 395 KMKNAKVPE---------------KRFAKAETKRSLFSKNSDDKKLKFGGFKSGSRVAPC 439

Query: 358 NDECSESTV--SNDSEEHYGNLKETED 432
           ++E   STV  S+ +E H+ N  E ED
Sbjct: 440 HEESPHSTVVASSGTENHHSNHNECED 466


Top