BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036980
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   184   8e-45
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   180   2e-43
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   179   3e-43
gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago t...   173   2e-41
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   171   7e-41

>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  184 bits (468), Expect = 8e-45
 Identities = 89/202 (44%), Positives = 123/202 (60%)
 Frame = +1

Query: 1    PLSPYLFILVSEALSRMVAKAEQQDELHGIKIRKHSPALTHLLYADDLILFTKANVMESG 180
            PLSPYLFI+V++A S+M+ +  Q  +LHG K  +  P ++HL +ADD +LFT+AN  E  
Sbjct: 642  PLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANRQECT 701

Query: 181  ALKKILDDYCEASGQKVNYEKSSVFFSRNVGXXXXXXXXXXWKMRNFEPTEKYLGVPIML 360
             +  IL+ Y  ASGQK+NYEKS V +SR V             MR  +  EKYLG+P + 
Sbjct: 702  IIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSIS 761

Query: 361  SRKKVEDFDYLVDKVHKKIKGWKAKVLSQAGRTTLIQSVVQATPLYAMSTYLLPVATCNK 540
             R K   FD L+D++ KK++GWK K+LS+AG+  L++SV+QA P Y M  Y  PV    K
Sbjct: 762  GRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQK 821

Query: 541  IDKACRDFWWAGKENTKSVHTK 606
            I  A   FWW   +  + +H K
Sbjct: 822  IQSAMARFWWGSSDTQRKIHWK 843


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  180 bits (456), Expect = 2e-43
 Identities = 90/200 (45%), Positives = 125/200 (62%)
 Frame = +1

Query: 1    PLSPYLFILVSEALSRMVAKAEQQDELHGIKIRKHSPALTHLLYADDLILFTKANVMESG 180
            PLSP+LFILV++A S+MV +     E+HG K  ++ P ++HLL+ADD +LFT+A   E  
Sbjct: 645  PLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATRQECL 704

Query: 181  ALKKILDDYCEASGQKVNYEKSSVFFSRNVGXXXXXXXXXXWKMRNFEPTEKYLGVPIML 360
             +  IL+ Y  ASGQK+NYEKS V FSR V             MR  +  +KYLG+P + 
Sbjct: 705  TIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALC 764

Query: 361  SRKKVEDFDYLVDKVHKKIKGWKAKVLSQAGRTTLIQSVVQATPLYAMSTYLLPVATCNK 540
             R K   F  L+D++ KK++GWK K+LS+AG+  LI++V+QA P Y M  Y LPVA   +
Sbjct: 765  GRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQE 824

Query: 541  IDKACRDFWWAGKENTKSVH 600
            I  A   FWW GK + + +H
Sbjct: 825  IHSAMARFWWGGKGDERKMH 844


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  179 bits (454), Expect = 3e-43
 Identities = 85/202 (42%), Positives = 126/202 (62%)
 Frame = +1

Query: 1    PLSPYLFILVSEALSRMVAKAEQQDELHGIKIRKHSPALTHLLYADDLILFTKANVMESG 180
            PLSPYLFIL+++A S+M+ K  Q+ +LHG K  +  P ++HL +AD  +LFT+A+  E  
Sbjct: 642  PLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASRQECA 701

Query: 181  ALKKILDDYCEASGQKVNYEKSSVFFSRNVGXXXXXXXXXXWKMRNFEPTEKYLGVPIML 360
             + +IL+ Y +ASGQK+NY+KS V FS+ V            +M+  E   KYLG+P + 
Sbjct: 702  IIVEILNLYEQASGQKINYDKSEVSFSKGVSIAQKEELSNILQMKQVERHMKYLGIPSIT 761

Query: 361  SRKKVEDFDYLVDKVHKKIKGWKAKVLSQAGRTTLIQSVVQATPLYAMSTYLLPVATCNK 540
             R +   FD L+D++ KK++GWK K+LS+AG+  L++SV+QA P Y M  Y LP +   K
Sbjct: 762  GRSRTAIFDSLMDRIWKKLQGWKEKLLSRAGKEILLKSVIQAIPTYLMGVYKLPCSIIQK 821

Query: 541  IDKACRDFWWAGKENTKSVHTK 606
            I  A   FWW   +  + +H K
Sbjct: 822  IHSAMARFWWGSSDTQRRIHWK 843


>gb|ABO80476.1| RNA-directed DNA polymerase , related [Medicago truncatula]
          Length = 405

 Score =  173 bits (439), Expect = 2e-41
 Identities = 84/199 (42%), Positives = 125/199 (62%)
 Frame = +1

Query: 1   PLSPYLFILVSEALSRMVAKAEQQDELHGIKIRKHSPALTHLLYADDLILFTKANVMESG 180
           PLSPYLFILV E LS ++ K   + ++HG+K+ + +P ++HLL+AD+  LF +ANV+E+ 
Sbjct: 26  PLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFADNCFLFCRANVVEAQ 85

Query: 181 ALKKILDDYCEASGQKVNYEKSSVFFSRNVGXXXXXXXXXXWKMRNFEPTEKYLGVPIML 360
            L  IL  Y  ASGQ++N  KS VFFSRN+             +R+   T KYLG+P M+
Sbjct: 86  RLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRHVMGTGKYLGLPSMI 145

Query: 361 SRKKVEDFDYLVDKVHKKIKGWKAKVLSQAGRTTLIQSVVQATPLYAMSTYLLPVATCNK 540
            R K   F ++ D + K+I  W+ + LS+AG+  +I+SV+Q+ P Y MS YLLP +  + 
Sbjct: 146 DRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLLPSSVIDD 205

Query: 541 IDKACRDFWWAGKENTKSV 597
           I+K    FWW G+ N + +
Sbjct: 206 IEKMVNAFWWGGRSNNRGI 224


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  171 bits (434), Expect = 7e-41
 Identities = 86/193 (44%), Positives = 121/193 (62%)
 Frame = +1

Query: 1   PLSPYLFILVSEALSRMVAKAEQQDELHGIKIRKHSPALTHLLYADDLILFTKANVMESG 180
           PLSPYLFIL +E +S ++ +AE+ + LHG+K+ K +P ++HLL+ADD  LF +AN  E+ 
Sbjct: 230 PLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETR 289

Query: 181 ALKKILDDYCEASGQKVNYEKSSVFFSRNVGXXXXXXXXXXWKMRNFEPTEKYLGVPIML 360
           ALK ILD Y  AS Q +N +KS ++FSRNV             +       KYLG+P M+
Sbjct: 290 ALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMI 349

Query: 361 SRKKVEDFDYLVDKVHKKIKGWKAKVLSQAGRTTLIQSVVQATPLYAMSTYLLPVATCNK 540
            R K   F+Y+ D++  +I G  +K+LSQAG+  LI+SV QA P Y MS +LLP +  + 
Sbjct: 350 GRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADD 409

Query: 541 IDKACRDFWWAGK 579
           I+K    FWW  K
Sbjct: 410 IEKMLNSFWWGMK 422