BLASTX nr result

ID: Coptis21_contig00036976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036976
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79542.1| hypothetical protein VITISV_025321 [Vitis vinifera]   234   5e-60
ref|XP_002282427.2| PREDICTED: uncharacterized protein LOC100250...   233   2e-59
emb|CBI21392.3| unnamed protein product [Vitis vinifera]              222   2e-56
ref|XP_002278310.1| PREDICTED: uncharacterized protein LOC100268...   220   8e-56
ref|XP_002518736.1| conserved hypothetical protein [Ricinus comm...   217   9e-55

>emb|CAN79542.1| hypothetical protein VITISV_025321 [Vitis vinifera]
          Length = 318

 Score =  234 bits (597), Expect = 5e-60
 Identities = 120/167 (71%), Positives = 140/167 (83%), Gaps = 2/167 (1%)
 Frame = +1

Query: 19  MKIGGGVTS--PCATVLPKLLLRRAKAHNIIRCSSSASLSFDHVSFIKDIAATQPPQHLQ 192
           M +G GV     CAT LP   LRR +A   ++CSSS+S    HVSFIKD+AATQPP+HL 
Sbjct: 1   MNVGVGVVHRPACATALP---LRRGRAR--VQCSSSSS---GHVSFIKDVAATQPPEHLH 52

Query: 193 CLLKILQTRGETIVSPGARKGLIPLAVPLSENQSGAVTALLRWPTAPPGMEMPVVEVRKH 372
           CLLK+LQTRGET++SPGAR+GLIPLA+PLS+  SGAVTALLRWPTAPP MEMPVVEVRKH
Sbjct: 53  CLLKMLQTRGETVISPGARQGLIPLAIPLSQKNSGAVTALLRWPTAPPRMEMPVVEVRKH 112

Query: 373 GVWLLAKNVDQYIHRILVEEDANNSDGSNGQLYNSSSEAGKELYIRG 513
           GVWLLAKNVDQYIHR+LVEEDANNS  +NG+L+++SSEAGK+LY  G
Sbjct: 113 GVWLLAKNVDQYIHRLLVEEDANNSHETNGELFHASSEAGKKLYRMG 159


>ref|XP_002282427.2| PREDICTED: uncharacterized protein LOC100250309 [Vitis vinifera]
           gi|297741253|emb|CBI32384.3| unnamed protein product
           [Vitis vinifera]
          Length = 339

 Score =  233 bits (593), Expect = 2e-59
 Identities = 119/167 (71%), Positives = 139/167 (83%), Gaps = 2/167 (1%)
 Frame = +1

Query: 19  MKIGGGVTS--PCATVLPKLLLRRAKAHNIIRCSSSASLSFDHVSFIKDIAATQPPQHLQ 192
           M +G GV     CAT LP   LRR +    ++CSSS+S    HVSFIKD+AATQPP+HL 
Sbjct: 1   MNVGVGVVHRPACATALP---LRRGRGR--VQCSSSSS---GHVSFIKDVAATQPPEHLH 52

Query: 193 CLLKILQTRGETIVSPGARKGLIPLAVPLSENQSGAVTALLRWPTAPPGMEMPVVEVRKH 372
           CLLK+LQTRGET++SPGAR+GLIPLA+PLS+  SGAVTALLRWPTAPP MEMPVVEVRKH
Sbjct: 53  CLLKMLQTRGETVISPGARQGLIPLAIPLSQKNSGAVTALLRWPTAPPRMEMPVVEVRKH 112

Query: 373 GVWLLAKNVDQYIHRILVEEDANNSDGSNGQLYNSSSEAGKELYIRG 513
           GVWLLAKNVDQYIHR+LVEEDANNS  +NG+L+++SSEAGK+LY  G
Sbjct: 113 GVWLLAKNVDQYIHRLLVEEDANNSHETNGELFHASSEAGKKLYRMG 159


>emb|CBI21392.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  222 bits (566), Expect = 2e-56
 Identities = 112/168 (66%), Positives = 136/168 (80%), Gaps = 2/168 (1%)
 Frame = +1

Query: 16  KMKIGGGVT--SPCATVLPKLLLRRAKAHNIIRCSSSASLSFDHVSFIKDIAATQPPQHL 189
           KM+ GGG+    P  T L  L     +     RCSSS S S DHVSFIKD+ AT PP+HL
Sbjct: 2   KMRTGGGLVYQRPRPTALYSLFPSHGRPK--FRCSSSYSSSSDHVSFIKDVGATSPPEHL 59

Query: 190 QCLLKILQTRGETIVSPGARKGLIPLAVPLSENQSGAVTALLRWPTAPPGMEMPVVEVRK 369
             LLK+LQ RGE+++SPGA++GLIPLAVPLS+N+SGAVT+LLRWPTAPPGMEMPVVEVRK
Sbjct: 60  PQLLKMLQVRGESVISPGAKQGLIPLAVPLSKNRSGAVTSLLRWPTAPPGMEMPVVEVRK 119

Query: 370 HGVWLLAKNVDQYIHRILVEEDANNSDGSNGQLYNSSSEAGKELYIRG 513
           HGVWLLAKNVDQYIHRILVEEDAN+S+  N +L+++S++AGK+LY +G
Sbjct: 120 HGVWLLAKNVDQYIHRILVEEDANHSEKRNDELFHASADAGKKLYRKG 167


>ref|XP_002278310.1| PREDICTED: uncharacterized protein LOC100268130 [Vitis vinifera]
          Length = 345

 Score =  220 bits (561), Expect = 8e-56
 Identities = 111/167 (66%), Positives = 135/167 (80%), Gaps = 2/167 (1%)
 Frame = +1

Query: 19  MKIGGGVT--SPCATVLPKLLLRRAKAHNIIRCSSSASLSFDHVSFIKDIAATQPPQHLQ 192
           M+ GGG+    P  T L  L     +     RCSSS S S DHVSFIKD+ AT PP+HL 
Sbjct: 1   MRTGGGLVYQRPRPTALYSLFPSHGRPK--FRCSSSYSSSSDHVSFIKDVGATSPPEHLP 58

Query: 193 CLLKILQTRGETIVSPGARKGLIPLAVPLSENQSGAVTALLRWPTAPPGMEMPVVEVRKH 372
            LLK+LQ RGE+++SPGA++GLIPLAVPLS+N+SGAVT+LLRWPTAPPGMEMPVVEVRKH
Sbjct: 59  QLLKMLQVRGESVISPGAKQGLIPLAVPLSKNRSGAVTSLLRWPTAPPGMEMPVVEVRKH 118

Query: 373 GVWLLAKNVDQYIHRILVEEDANNSDGSNGQLYNSSSEAGKELYIRG 513
           GVWLLAKNVDQYIHRILVEEDAN+S+  N +L+++S++AGK+LY +G
Sbjct: 119 GVWLLAKNVDQYIHRILVEEDANHSEKRNDELFHASADAGKKLYRKG 165


>ref|XP_002518736.1| conserved hypothetical protein [Ricinus communis]
           gi|223542117|gb|EEF43661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 373

 Score =  217 bits (552), Expect = 9e-55
 Identities = 117/177 (66%), Positives = 135/177 (76%), Gaps = 7/177 (3%)
 Frame = +1

Query: 4   KELKKMKIGG-GV---TSPCATVLPKLLLRRAKAHNI---IRCSSSASLSFDHVSFIKDI 162
           K    M+IG  GV   T P A   P+        HN    +RC SS+     HV FIKD+
Sbjct: 29  KSEANMRIGAVGVVHRTPPTANTFPR--------HNFRPRVRCFSSSG----HVLFIKDV 76

Query: 163 AATQPPQHLQCLLKILQTRGETIVSPGARKGLIPLAVPLSENQSGAVTALLRWPTAPPGM 342
           A TQPP+HL  LLK+LQTRGETI+SPG+R+GLIPL VPLSENQSG+VTALLRWPTAP GM
Sbjct: 77  AVTQPPEHLHHLLKMLQTRGETIISPGSRQGLIPLIVPLSENQSGSVTALLRWPTAPSGM 136

Query: 343 EMPVVEVRKHGVWLLAKNVDQYIHRILVEEDANNSDGSNGQLYNSSSEAGKELYIRG 513
           EMPVVEVRKHGVWLLAKNVDQYIHRI+VEEDA+   GSNG+LY++SSEAG++LY RG
Sbjct: 137 EMPVVEVRKHGVWLLAKNVDQYIHRIVVEEDASQCHGSNGELYDASSEAGEKLYRRG 193


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