BLASTX nr result
ID: Coptis21_contig00036971
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036971 (785 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABI34306.1| Polyprotein, putative [Solanum demissum] 257 2e-66 gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola... 223 5e-56 ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854... 186 4e-45 gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 183 4e-44 emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] 181 2e-43 >gb|ABI34306.1| Polyprotein, putative [Solanum demissum] Length = 1691 Score = 257 bits (656), Expect = 2e-66 Identities = 130/268 (48%), Positives = 178/268 (66%), Gaps = 9/268 (3%) Frame = +2 Query: 2 DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181 DKLPPSWK+F+ +RHK KE S+E+LIM++R+EEE+R QD + ++ KVN+I + Sbjct: 156 DKLPPSWKEFQKTMRHKQKETSLETLIMKIRMEEEARGQDALLQTEENNITTKVNLITSN 215 Query: 182 ANKTNSXXXXXXXXXXXXXXXXXXXXXXQ---DNVNQRPPVDMTEIVCYTCKKKGHYARN 352 S + +N+ + + C+ C K GH AR Sbjct: 216 NATPESHKNTSLKPKKKKFKKNNGRPPKKNNGENIQAQNQQVQDKGPCFVCGKSGHIARF 275 Query: 353 CKNRN-----EANVTEDTFVAMITEVNSVNVSEGWWADTGASRHVCFDRNWFKSYTTTVN 517 C+ R +ANVTE+ FVA+IT++N V +GWWAD+GA+RHVC+D++WFK YT Sbjct: 276 CRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYTHFEE 335 Query: 518 QE-VLLGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNKAGFQQVI 694 + ++LGD+HT +V+G+GDVEL FTSG+ L LKDVL+TP +RK L+S F+LNKAGF+Q+I Sbjct: 336 PKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQII 395 Query: 695 GSDQYVITKSGIFVGKGYACNGMFKLNV 778 S+QYVI K GIFVGKGYAC+GMFKLNV Sbjct: 396 ESNQYVIVKKGIFVGKGYACDGMFKLNV 423 >gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum] Length = 853 Score = 223 bits (567), Expect = 5e-56 Identities = 120/269 (44%), Positives = 161/269 (59%), Gaps = 11/269 (4%) Frame = +2 Query: 2 DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQD-----HNEEVAMSSAKAKVN 166 DKLPPSWK+F+ + HK KE S+E+ IM++ +EEE+R QD + K K Sbjct: 23 DKLPPSWKEFQKTMCHKQKETSVETFIMKIHMEEEARGQDALLQIEESNITTKPKKKKFK 82 Query: 167 IINQHANKTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMTEIVCYTCKKKGHYA 346 N K N+ ++N Q V + C+ C K GH A Sbjct: 83 KNNGRPPKKNNG---------------------ENNQAQNQQVQ-DKGPCFVCGKSGHIA 120 Query: 347 RNCKNRN-----EANVTEDTFVAMITEVNSVNVSEGWWADTGASRHVCFDRNWFKSYTTT 511 R C+ R +ANVTE+ FVA+IT++N V +GWW D+GA+RHVC+D++WFK YT Sbjct: 121 RFCRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWVDSGANRHVCYDKDWFKKYTHF 180 Query: 512 VNQE-VLLGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNKAGFQQ 688 + ++LGD HT +V+G GDVEL F+SG++L LKDVL+TP +RKNL+S F+ NK GF+Q Sbjct: 181 EEPKTIMLGDAHTTQVLGKGDVELCFSSGRELTLKDVLYTPSMRKNLMSSFLFNKVGFKQ 240 Query: 689 VIGSDQYVITKSGIFVGKGYACNGMFKLN 775 +I SDQYVI K GIFVGKG M K N Sbjct: 241 IIESDQYVIVKKGIFVGKGLRLIPMIKKN 269 >ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis vinifera] Length = 478 Score = 186 bits (473), Expect = 4e-45 Identities = 110/275 (40%), Positives = 163/275 (59%), Gaps = 16/275 (5%) Frame = +2 Query: 2 DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181 +KLPP+WKDF+N L+HK KE S+E LI+RLRIEE++R+ + ++ AKA Q Sbjct: 190 EKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQS 249 Query: 182 AN-KTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMTEIVCYTCKKKGHYARNC- 355 +N KTN+ + ++++P C+ C K+GH + +C Sbjct: 250 SNAKTNNNKGKGSKLGP------------KGGISKKPKFQGK---CFNCGKQGHKSVDCR 294 Query: 356 ---KNR-NEANVTEDT--------FVAMITEVNSVNVS-EGWWADTGASRHVCFDRNWFK 496 KN+ EANV +D +++EVN V + + WW DTGA+RHVC D+ F Sbjct: 295 LPKKNKPKEANVIDDITKNVYDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFS 354 Query: 497 SYTTTVNQE-VLLGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNK 673 ++ N E V +G++ T ++ G G V L TSGK+L L +VL+ P+IRKNLVSG +LN Sbjct: 355 TFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNN 414 Query: 674 AGFQQVIGSDQYVITKSGIFVGKGYACNGMFKLNV 778 GF+ V S++ V++KSG++VGKGY +GM+KLNV Sbjct: 415 HGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNV 449 >gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata] Length = 1034 Score = 183 bits (464), Expect = 4e-44 Identities = 107/289 (37%), Positives = 147/289 (50%), Gaps = 30/289 (10%) Frame = +2 Query: 2 DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181 DKLPPSWK FR +L+HK +E S+ L LRIEE R Q+ + + + +N++ + Sbjct: 107 DKLPPSWKGFRRMLKHKKEELSLVQLGSHLRIEESLRVQEGGKPKDKEAETSSINMMKES 166 Query: 182 ANKTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMTEIVCYTCKKKGHYARNCKN 361 + D N+R + VC+ C K GH+ R+C+ Sbjct: 167 GSSKMKNKGKKRPFTNNT----------NDGSNKR-----FKSVCWICNKPGHFKRDCRA 211 Query: 362 RNEANVTEDT----------------------------FVAMITEVNSVNVSE-GWWADT 454 + N + +V+ I EV V E WW D+ Sbjct: 212 AKDKNKMQQKRFGQGSKDQDPSSHQGQNSVFDLHSKVYYVSKIAEVFYVQDDEVAWWIDS 271 Query: 455 GASRHVCFDRNWFKSYTTTVNQEVL-LGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTP 631 GA+ HVC DR WFK+Y + VL +G+ T ++G G V L F+SGK L L DV+H P Sbjct: 272 GATIHVCKDRGWFKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSSGKTLDLNDVIHVP 331 Query: 632 DIRKNLVSGFILNKAGFQQVIGSDQYVITKSGIFVGKGYACNGMFKLNV 778 IRKNLVSG +LNK GF+QV SD+YV++K G+FVG GY CNGMF LN+ Sbjct: 332 GIRKNLVSGSVLNKCGFKQVYESDKYVLSKCGVFVGFGYFCNGMFMLNI 380 >emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera] Length = 1316 Score = 181 bits (458), Expect = 2e-43 Identities = 106/261 (40%), Positives = 147/261 (56%), Gaps = 2/261 (0%) Frame = +2 Query: 2 DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181 +KLPP WKDF+N L+HK KE ++E LI+RLRIEE++RK +E+ +S +AK N+I Q Sbjct: 360 EKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRK---SEKKGNNSMEAKANVIEQ- 415 Query: 182 ANKTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMT-EIVCYTCKKKGHYARNCK 358 KTN N NQ V + CY C K GH + + + Sbjct: 416 GPKTNKKRKHG-----------------DQNQNQESNVAKKFKGKCYNCGKTGHKSNDYR 458 Query: 359 NRNEANVTEDTFVAMITEVNSVNVSEGWWADTGASRHVCFDRNWFKSYTTTV-NQEVLLG 535 N E WW DTGA+RH+C ++ F +Y N+E+ +G Sbjct: 459 NTKE-----------------------WWVDTGATRHICSNKWMFSTYKPVEQNEELFMG 495 Query: 536 DNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNKAGFQQVIGSDQYVI 715 ++ + K+ G G V L TSGK+L L DVLH PDI KNLVSG +L+K GF+ V SD++V+ Sbjct: 496 NSSSSKIEGRGKVILKMTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVL 555 Query: 716 TKSGIFVGKGYACNGMFKLNV 778 TK+ +FVGKGY +G+FK+NV Sbjct: 556 TKNEMFVGKGYLSDGLFKMNV 576