BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036971
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               257   2e-66
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola...   223   5e-56
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   186   4e-45
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   183   4e-44
emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   181   2e-43

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  257 bits (656), Expect = 2e-66
 Identities = 130/268 (48%), Positives = 178/268 (66%), Gaps = 9/268 (3%)
 Frame = +2

Query: 2   DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181
           DKLPPSWK+F+  +RHK KE S+E+LIM++R+EEE+R QD   +   ++   KVN+I  +
Sbjct: 156 DKLPPSWKEFQKTMRHKQKETSLETLIMKIRMEEEARGQDALLQTEENNITTKVNLITSN 215

Query: 182 ANKTNSXXXXXXXXXXXXXXXXXXXXXXQ---DNVNQRPPVDMTEIVCYTCKKKGHYARN 352
                S                      +   +N+  +      +  C+ C K GH AR 
Sbjct: 216 NATPESHKNTSLKPKKKKFKKNNGRPPKKNNGENIQAQNQQVQDKGPCFVCGKSGHIARF 275

Query: 353 CKNRN-----EANVTEDTFVAMITEVNSVNVSEGWWADTGASRHVCFDRNWFKSYTTTVN 517
           C+ R      +ANVTE+ FVA+IT++N V   +GWWAD+GA+RHVC+D++WFK YT    
Sbjct: 276 CRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWADSGANRHVCYDKDWFKKYTHFEE 335

Query: 518 QE-VLLGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNKAGFQQVI 694
            + ++LGD+HT +V+G+GDVEL FTSG+ L LKDVL+TP +RK L+S F+LNKAGF+Q+I
Sbjct: 336 PKTIMLGDSHTTQVLGTGDVELCFTSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQII 395

Query: 695 GSDQYVITKSGIFVGKGYACNGMFKLNV 778
            S+QYVI K GIFVGKGYAC+GMFKLNV
Sbjct: 396 ESNQYVIVKKGIFVGKGYACDGMFKLNV 423


>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
          Length = 853

 Score =  223 bits (567), Expect = 5e-56
 Identities = 120/269 (44%), Positives = 161/269 (59%), Gaps = 11/269 (4%)
 Frame = +2

Query: 2   DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQD-----HNEEVAMSSAKAKVN 166
           DKLPPSWK+F+  + HK KE S+E+ IM++ +EEE+R QD         +     K K  
Sbjct: 23  DKLPPSWKEFQKTMCHKQKETSVETFIMKIHMEEEARGQDALLQIEESNITTKPKKKKFK 82

Query: 167 IINQHANKTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMTEIVCYTCKKKGHYA 346
             N    K N+                      ++N  Q   V   +  C+ C K GH A
Sbjct: 83  KNNGRPPKKNNG---------------------ENNQAQNQQVQ-DKGPCFVCGKSGHIA 120

Query: 347 RNCKNRN-----EANVTEDTFVAMITEVNSVNVSEGWWADTGASRHVCFDRNWFKSYTTT 511
           R C+ R      +ANVTE+ FVA+IT++N V   +GWW D+GA+RHVC+D++WFK YT  
Sbjct: 121 RFCRFRKRGPNPQANVTEEPFVAVITDINMVENVDGWWVDSGANRHVCYDKDWFKKYTHF 180

Query: 512 VNQE-VLLGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNKAGFQQ 688
              + ++LGD HT +V+G GDVEL F+SG++L LKDVL+TP +RKNL+S F+ NK GF+Q
Sbjct: 181 EEPKTIMLGDAHTTQVLGKGDVELCFSSGRELTLKDVLYTPSMRKNLMSSFLFNKVGFKQ 240

Query: 689 VIGSDQYVITKSGIFVGKGYACNGMFKLN 775
           +I SDQYVI K GIFVGKG     M K N
Sbjct: 241 IIESDQYVIVKKGIFVGKGLRLIPMIKKN 269


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  186 bits (473), Expect = 4e-45
 Identities = 110/275 (40%), Positives = 163/275 (59%), Gaps = 16/275 (5%)
 Frame = +2

Query: 2   DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181
           +KLPP+WKDF+N L+HK KE S+E LI+RLRIEE++R+ +      ++ AKA      Q 
Sbjct: 190 EKLPPAWKDFKNYLKHKRKEMSIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQS 249

Query: 182 AN-KTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMTEIVCYTCKKKGHYARNC- 355
           +N KTN+                      +  ++++P        C+ C K+GH + +C 
Sbjct: 250 SNAKTNNNKGKGSKLGP------------KGGISKKPKFQGK---CFNCGKQGHKSVDCR 294

Query: 356 ---KNR-NEANVTEDT--------FVAMITEVNSVNVS-EGWWADTGASRHVCFDRNWFK 496
              KN+  EANV +D            +++EVN V  + + WW DTGA+RHVC D+  F 
Sbjct: 295 LPKKNKPKEANVIDDITKNVYDIDLTTVVSEVNLVGSNPKEWWIDTGATRHVCSDKKMFS 354

Query: 497 SYTTTVNQE-VLLGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNK 673
           ++    N E V +G++ T ++ G G V L  TSGK+L L +VL+ P+IRKNLVSG +LN 
Sbjct: 355 TFEPIENGEKVFMGNSATSEIKGQGKVILKMTSGKELTLTNVLYVPEIRKNLVSGSLLNN 414

Query: 674 AGFQQVIGSDQYVITKSGIFVGKGYACNGMFKLNV 778
            GF+ V  S++ V++KSG++VGKGY  +GM+KLNV
Sbjct: 415 HGFRLVFDSNKVVLSKSGMYVGKGYMSDGMWKLNV 449


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  183 bits (464), Expect = 4e-44
 Identities = 107/289 (37%), Positives = 147/289 (50%), Gaps = 30/289 (10%)
 Frame = +2

Query: 2   DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181
           DKLPPSWK FR +L+HK +E S+  L   LRIEE  R Q+  +     +  + +N++ + 
Sbjct: 107 DKLPPSWKGFRRMLKHKKEELSLVQLGSHLRIEESLRVQEGGKPKDKEAETSSINMMKES 166

Query: 182 ANKTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMTEIVCYTCKKKGHYARNCKN 361
            +                           D  N+R      + VC+ C K GH+ R+C+ 
Sbjct: 167 GSSKMKNKGKKRPFTNNT----------NDGSNKR-----FKSVCWICNKPGHFKRDCRA 211

Query: 362 RNEANVTEDT----------------------------FVAMITEVNSVNVSE-GWWADT 454
             + N  +                              +V+ I EV  V   E  WW D+
Sbjct: 212 AKDKNKMQQKRFGQGSKDQDPSSHQGQNSVFDLHSKVYYVSKIAEVFYVQDDEVAWWIDS 271

Query: 455 GASRHVCFDRNWFKSYTTTVNQEVL-LGDNHTIKVVGSGDVELVFTSGKKLVLKDVLHTP 631
           GA+ HVC DR WFK+Y    +  VL +G+  T  ++G G V L F+SGK L L DV+H P
Sbjct: 272 GATIHVCKDRGWFKTYEPVQDGSVLYMGNESTAPILGRGKVVLEFSSGKTLDLNDVIHVP 331

Query: 632 DIRKNLVSGFILNKAGFQQVIGSDQYVITKSGIFVGKGYACNGMFKLNV 778
            IRKNLVSG +LNK GF+QV  SD+YV++K G+FVG GY CNGMF LN+
Sbjct: 332 GIRKNLVSGSVLNKCGFKQVYESDKYVLSKCGVFVGFGYFCNGMFMLNI 380


>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  181 bits (458), Expect = 2e-43
 Identities = 106/261 (40%), Positives = 147/261 (56%), Gaps = 2/261 (0%)
 Frame = +2

Query: 2    DKLPPSWKDFRNILRHKSKEFSMESLIMRLRIEEESRKQDHNEEVAMSSAKAKVNIINQH 181
            +KLPP WKDF+N L+HK KE ++E LI+RLRIEE++RK   +E+   +S +AK N+I Q 
Sbjct: 360  EKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRK---SEKKGNNSMEAKANVIEQ- 415

Query: 182  ANKTNSXXXXXXXXXXXXXXXXXXXXXXQDNVNQRPPVDMT-EIVCYTCKKKGHYARNCK 358
              KTN                         N NQ   V    +  CY C K GH + + +
Sbjct: 416  GPKTNKKRKHG-----------------DQNQNQESNVAKKFKGKCYNCGKTGHKSNDYR 458

Query: 359  NRNEANVTEDTFVAMITEVNSVNVSEGWWADTGASRHVCFDRNWFKSYTTTV-NQEVLLG 535
            N  E                       WW DTGA+RH+C ++  F +Y     N+E+ +G
Sbjct: 459  NTKE-----------------------WWVDTGATRHICSNKWMFSTYKPVEQNEELFMG 495

Query: 536  DNHTIKVVGSGDVELVFTSGKKLVLKDVLHTPDIRKNLVSGFILNKAGFQQVIGSDQYVI 715
            ++ + K+ G G V L  TSGK+L L DVLH PDI KNLVSG +L+K GF+ V  SD++V+
Sbjct: 496  NSSSSKIEGRGKVILKMTSGKELTLNDVLHVPDICKNLVSGSLLSKNGFKLVFVSDKFVL 555

Query: 716  TKSGIFVGKGYACNGMFKLNV 778
            TK+ +FVGKGY  +G+FK+NV
Sbjct: 556  TKNEMFVGKGYLSDGLFKMNV 576