BLASTX nr result

ID: Coptis21_contig00036944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036944
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vi...   196   1e-48
ref|XP_003544882.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Gl...   196   2e-48
gb|ACU17137.1| unknown [Glycine max]                                  194   5e-48
ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMA...   193   1e-47
ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-lik...   193   1e-47

>ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vitis vinifera]
           gi|147833025|emb|CAN61895.1| hypothetical protein
           VITISV_028792 [Vitis vinifera]
           gi|297745903|emb|CBI15959.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  196 bits (499), Expect = 1e-48
 Identities = 85/106 (80%), Positives = 98/106 (92%)
 Frame = +1

Query: 4   GHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVSMEHGVVPARKRNTRSPLDFVFER 183
           GHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPH+V+ EHGV+PA  RNTRS LD+VF R
Sbjct: 84  GHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHKVATEHGVIPAPNRNTRSSLDYVFRR 143

Query: 184 QIRTNVPKIKPAFVIPDQVDCAVIRYHSRRVTCLEFHPTNNHILLS 321
           Q++ ++P IK AF++P+QVDCAVIRYHSRRVTCLEFHPTNN+ILLS
Sbjct: 144 QLQPDIPAIKTAFIVPNQVDCAVIRYHSRRVTCLEFHPTNNNILLS 189


>ref|XP_003544882.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Glycine max]
          Length = 561

 Score =  196 bits (498), Expect = 2e-48
 Identities = 86/106 (81%), Positives = 97/106 (91%)
 Frame = +1

Query: 4   GHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVSMEHGVVPARKRNTRSPLDFVFER 183
           GHEAGFKGATY+DCPMKPC+LCKMPGHTT+TCPHRVS EHGVVPA +R T  PLD+VFER
Sbjct: 89  GHEAGFKGATYVDCPMKPCFLCKMPGHTTLTCPHRVSTEHGVVPAPRRKTCKPLDYVFER 148

Query: 184 QIRTNVPKIKPAFVIPDQVDCAVIRYHSRRVTCLEFHPTNNHILLS 321
           Q+R ++P IKP +VIPDQV+CAVIRYHSRRVTCLEFHPT N+ILLS
Sbjct: 149 QLRPSLPSIKPKYVIPDQVNCAVIRYHSRRVTCLEFHPTKNNILLS 194


>gb|ACU17137.1| unknown [Glycine max]
          Length = 200

 Score =  194 bits (494), Expect = 5e-48
 Identities = 85/106 (80%), Positives = 96/106 (90%)
 Frame = +1

Query: 4   GHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVSMEHGVVPARKRNTRSPLDFVFER 183
           GHEAGFKGATY+DCPMKPC+LCKMPGHTT+TCPHRVS EHGVVPA +R T  PLD+VFER
Sbjct: 86  GHEAGFKGATYVDCPMKPCFLCKMPGHTTLTCPHRVSTEHGVVPAPRRKTCKPLDYVFER 145

Query: 184 QIRTNVPKIKPAFVIPDQVDCAVIRYHSRRVTCLEFHPTNNHILLS 321
           Q+R ++P IKP +VIPDQV+CA IRYHSRRVTCLEFHPT N+ILLS
Sbjct: 146 QLRPSLPSIKPKYVIPDQVNCAAIRYHSRRVTCLEFHPTKNNILLS 191


>ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMAGED DNA-BINDING 2-like
           [Cucumis sativus]
          Length = 562

 Score =  193 bits (490), Expect = 1e-47
 Identities = 85/107 (79%), Positives = 97/107 (90%)
 Frame = +1

Query: 1   TGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVSMEHGVVPARKRNTRSPLDFVFE 180
           TGHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPHRV+ E GV+PA  +NTR+ L +VFE
Sbjct: 83  TGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVATEFGVIPASHKNTRNALLYVFE 142

Query: 181 RQIRTNVPKIKPAFVIPDQVDCAVIRYHSRRVTCLEFHPTNNHILLS 321
           RQ + ++P IKPA+VIPDQV+CAVIRYHSRRVTCLEFHPTNN +LLS
Sbjct: 143 RQFKPHIPPIKPAYVIPDQVNCAVIRYHSRRVTCLEFHPTNNRLLLS 189


>ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-like [Cucumis sativus]
          Length = 562

 Score =  193 bits (490), Expect = 1e-47
 Identities = 85/107 (79%), Positives = 97/107 (90%)
 Frame = +1

Query: 1   TGHEAGFKGATYIDCPMKPCYLCKMPGHTTMTCPHRVSMEHGVVPARKRNTRSPLDFVFE 180
           TGHEAGFKGATYIDCPMKPC+LCKMPGHTTMTCPHRV+ E GV+PA  +NTR+ L +VFE
Sbjct: 83  TGHEAGFKGATYIDCPMKPCFLCKMPGHTTMTCPHRVATEFGVIPASHKNTRNALLYVFE 142

Query: 181 RQIRTNVPKIKPAFVIPDQVDCAVIRYHSRRVTCLEFHPTNNHILLS 321
           RQ + ++P IKPA+VIPDQV+CAVIRYHSRRVTCLEFHPTNN +LLS
Sbjct: 143 RQFKPHIPPIKPAYVIPDQVNCAVIRYHSRRVTCLEFHPTNNRLLLS 189


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