BLASTX nr result

ID: Coptis21_contig00036936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036936
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [...    82   7e-14
emb|CBI24140.3| unnamed protein product [Vitis vinifera]               75   5e-12
ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258...    70   2e-10
ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10
ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|2...    69   6e-10

>ref|XP_002265355.2| PREDICTED: transcription factor MYB23-like [Vitis vinifera]
           gi|147854236|emb|CAN83435.1| hypothetical protein
           VITISV_010137 [Vitis vinifera]
          Length = 337

 Score = 81.6 bits (200), Expect = 7e-14
 Identities = 64/165 (38%), Positives = 93/165 (56%), Gaps = 17/165 (10%)
 Frame = +2

Query: 32  PPLP------QASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSPI--TPL----SST 175
           PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   S I  TP+    SS+
Sbjct: 178 PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSSIGSTPIISSSSSS 236

Query: 176 SMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNTAVQVMQQDKV-----VGDQVELEAR 340
           S+NP G GFLD EN +W +  +E +  P  E++ T     Q D+      +G+      +
Sbjct: 237 SVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKNKINIGEMGNDHEQ 294

Query: 341 DNGQDMDTSFSECSNFDLEFMESPLISCGLMYNNMNSMDHQLSWD 475
             GQD+D SF + S+FDLEF+ES L+S G +  +++SMD  L+W+
Sbjct: 295 KCGQDIDVSF-DSSSFDLEFVESTLLS-GAICRDLSSMD-DLAWN 336


>emb|CBI24140.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 58/147 (39%), Positives = 81/147 (55%), Gaps = 17/147 (11%)
 Frame = +2

Query: 32  PPLP------QASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSPI--TPL----SST 175
           PPLP      Q +M+I   +YQN N VW  A DQ+S  +  F   S I  TP+    SS+
Sbjct: 178 PPLPPTQPSLQQTMAIPNSEYQNPNPVW-TAKDQSSQYTISFPCGSSIGSTPIISSSSSS 236

Query: 176 SMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNTAVQVMQQDKV-----VGDQVELEAR 340
           S+NP G GFLD EN +W +  +E +  P  E++ T     Q D+      +G+      +
Sbjct: 237 SVNPFGFGFLD-ENLIW-NAHVEPLEGPRLEQVQTHQYQDQHDQQKNKINIGEMGNDHEQ 294

Query: 341 DNGQDMDTSFSECSNFDLEFMESPLIS 421
             GQD+D SF + S+FDLEF+ES L+S
Sbjct: 295 KCGQDIDVSF-DSSSFDLEFVESTLLS 320


>ref|XP_002265578.1| PREDICTED: uncharacterized protein LOC100258147 [Vitis vinifera]
           gi|297738187|emb|CBI27388.3| unnamed protein product
           [Vitis vinifera]
          Length = 345

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
 Frame = +2

Query: 5   PPHASSTIHPPLPQASMSISTLDYQNQNHVW-PAANDQNSPASTYFANQSPI---TPLSS 172
           PP  S++IHPP      +I   ++ N N+VW    +DQN  A     N+S +   TP+  
Sbjct: 185 PPDTSNSIHPPSLHGISAIPPFEFLNPNYVWMTTVSDQNQHAVMELVNRSSMGRSTPIGP 244

Query: 173 TSMNPSGLGFLDHENCLWSDGGIESMVTPTEEEMNTAVQVMQQDKVV-GDQVELEARDNG 349
             +NPSG   L+      +   +E       +++    Q  ++DKV  G     +   NG
Sbjct: 245 YQINPSGFEVLEENYMRDTIASLE-----PRKQLEGVQQQQEEDKVCEGKADNSKELRNG 299

Query: 350 QDMDTSFSECSNFDLEFMESPLISCGL-MY--NNMNSMDHQLSW 472
           +++D SF  CS FDLE   S L+ CG  MY  +  +S   QL+W
Sbjct: 300 ENIDNSFDSCS-FDLELEYSGLLPCGTGMYCSSTSSSCIDQLTW 342


>ref|XP_002299386.1| predicted protein [Populus trichocarpa] gi|222846644|gb|EEE84191.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 60/161 (37%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
 Frame = +2

Query: 29  HPPLPQASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSPI--TPLSSTSMNPSGLGF 202
           +PPL     SI T +YQN          Q    ST  A+QS I   P+ S++ +PS  G 
Sbjct: 186 NPPLSHEFSSILTYEYQNPR-------TQTFLEST--ASQSSIGSVPIFSSTSHPSEFGM 236

Query: 203 LDHENCLWSDGGIESMVTPTEEEMNTAVQVMQQ---DKVVGDQVELEARDNGQDMDTSFS 373
           LD E+C+W+ G       PT+  +    Q  QQ   +K+ G     E    GQ+MD SF 
Sbjct: 237 LD-ESCMWAGG-----YDPTQSIIPEKKQPEQQVGIEKITGH----ELTSAGQNMDASF- 285

Query: 374 ECSNFDLEF------MESPLISCGLMYNNMNSMDHQLSWDS 478
           E SNFD +F      +ES L+ CG+ YN   S   QL+WDS
Sbjct: 286 ETSNFDFDFDFDFDFVESTLLPCGMYYN--QSPIDQLAWDS 324


>ref|XP_002303715.1| predicted protein [Populus trichocarpa] gi|222841147|gb|EEE78694.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
 Frame = +2

Query: 5   PPHASSTIHPPLPQASMSISTLDYQNQNHVWPAANDQNSPASTYFANQSPITPLSSTSMN 184
           PP   +  +PPL     SIST +YQN N +    +   S   +         P+SS++ +
Sbjct: 195 PPVPDTNPYPPLLHKFSSISTCEYQNPNTLAFLESGSKSSIGS--------VPVSSSTSH 246

Query: 185 PSGLGFLDHENCLWSDGG--IESMVTPTEE-EMNTAVQVMQQDKVVGDQVELEARDNGQD 355
           PS  G LD E C+W+ G   I+S+ +  E+ E    + + + ++++G          GQ+
Sbjct: 247 PSEFGMLD-ETCMWAGGYELIQSIKSEKEQPEQQVELTIEKTNELIGA---------GQN 296

Query: 356 MDTSFSECSNFDLEFMESPLISCGLMYN 439
           M  SF E S FD +F+ES L+ CG+ YN
Sbjct: 297 MVASF-ETSTFDFDFLESTLLPCGMYYN 323


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