BLASTX nr result

ID: Coptis21_contig00036933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036933
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511353.1| conserved hypothetical protein [Ricinus comm...   168   5e-40
emb|CBI14983.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002321620.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002318681.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_003522393.1| PREDICTED: uncharacterized protein LOC100804...   128   4e-28

>ref|XP_002511353.1| conserved hypothetical protein [Ricinus communis]
           gi|223550468|gb|EEF51955.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 342

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/122 (67%), Positives = 99/122 (81%), Gaps = 2/122 (1%)
 Frame = -2

Query: 365 EKANQGIQHKEDIQEAIVWYNKVLGLRIEGGHGVKFIFNNINMKDPKKEYSFTVLLAHDT 186
           +K NQGI+HKE+IQEA+ WYNKVLG  IEGG GVKF FNNINM++P +EY+FTV   +DT
Sbjct: 116 DKGNQGIEHKEEIQEALSWYNKVLGFYIEGGRGVKFTFNNINMRNPYEEYTFTVRHENDT 175

Query: 185 YTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTMREKFRASASLGSQAQLVQL--DSSTVS 12
           YTLL CDPH++ TKELI E+N+TNGLFKFVRTMREKF+  ASLG   Q   L  +S+T+S
Sbjct: 176 YTLLACDPHLNDTKELINELNKTNGLFKFVRTMREKFQEVASLGILPQSTSLHQESATIS 235

Query: 11  VS 6
           VS
Sbjct: 236 VS 237


>emb|CBI14983.3| unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 2/126 (1%)
 Frame = -2

Query: 377 ATLDEKANQGIQHKEDIQEAIVWYNKVLGLRIEGGHGVKFIFNNINMKDPKKEYSFTVLL 198
           AT + K +Q    +E+IQEAI WYN+VLG +IEGGHGVKFIF NIN K+P +EYSFT+  
Sbjct: 130 ATYEGKGDQVTGRREEIQEAIAWYNEVLGFQIEGGHGVKFIFTNINSKNPSEEYSFTIRH 189

Query: 197 AHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTMREKFRASASLGSQAQLVQL--DS 24
           A+DTYTLL C PH++  KELI E+N+TNGLFKFVR MREKF+ +A  G   Q   L   S
Sbjct: 190 ANDTYTLLDCSPHLNDIKELIHELNRTNGLFKFVRIMREKFQKAAEFGVLPQFTPLHQHS 249

Query: 23  STVSVS 6
           ST+S+S
Sbjct: 250 STISIS 255


>ref|XP_002321620.1| predicted protein [Populus trichocarpa] gi|222868616|gb|EEF05747.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  146 bits (369), Expect = 2e-33
 Identities = 67/108 (62%), Positives = 85/108 (78%)
 Frame = -2

Query: 377 ATLDEKANQGIQHKEDIQEAIVWYNKVLGLRIEGGHGVKFIFNNINMKDPKKEYSFTVLL 198
           AT  E  +Q I H+ +IQEA++WYN VLG +IEGG GVKF FNNIN+K+P KEYSFT+  
Sbjct: 130 ATSKETEHQDIDHRREIQEAMLWYNMVLGFKIEGGRGVKFTFNNINLKNPYKEYSFTIRY 189

Query: 197 AHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTMREKFRASASLG 54
            +D YTLL CDP ++ TK+LI E+N+TNGLFKFVR +REKF+ +A LG
Sbjct: 190 ENDMYTLLACDPQLNDTKQLIHELNKTNGLFKFVRKLREKFQEAAPLG 237


>ref|XP_002318681.1| predicted protein [Populus trichocarpa] gi|222859354|gb|EEE96901.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/108 (62%), Positives = 84/108 (77%)
 Frame = -2

Query: 377 ATLDEKANQGIQHKEDIQEAIVWYNKVLGLRIEGGHGVKFIFNNINMKDPKKEYSFTVLL 198
           AT +E  +Q I HK DIQEA++WYN+VLG +IEGG GVKF  NNIN+K+  +E SFT+  
Sbjct: 130 ATSEEIEHQDIDHKRDIQEAMLWYNRVLGFKIEGGQGVKFTLNNINLKNQDEECSFTIRH 189

Query: 197 AHDTYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTMREKFRASASLG 54
            +D YTLL CDP ++ TK+LI E+N+TNGLFKFVR MREKF  SASLG
Sbjct: 190 ENDMYTLLGCDPQLNDTKQLIHELNKTNGLFKFVRKMREKFEESASLG 237


>ref|XP_003522393.1| PREDICTED: uncharacterized protein LOC100804876 [Glycine max]
          Length = 229

 Score =  128 bits (322), Expect = 4e-28
 Identities = 56/106 (52%), Positives = 79/106 (74%)
 Frame = -2

Query: 368 DEKANQGIQHKEDIQEAIVWYNKVLGLRIEGGHGVKFIFNNINMKDPKKEYSFTVLLAHD 189
           ++K+N+  +H++++QEAI WYN++LG +IEGG GVKF F NIN+ +P +E+ FT+    D
Sbjct: 118 EQKSNESSEHRDEVQEAISWYNRILGFQIEGGRGVKFSFKNINVDNPNEEFFFTIRHEDD 177

Query: 188 TYTLLTCDPHMDGTKELIQEMNQTNGLFKFVRTMREKFRASASLGS 51
            YTLL C P +  T ELI E+N TNGLFKFVRTMR+KF+   + G+
Sbjct: 178 VYTLLNCKPSVKDTDELIHELNNTNGLFKFVRTMRKKFQEVVAQGT 223


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