BLASTX nr result

ID: Coptis21_contig00036929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036929
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]   132   3e-30
ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   135   3e-30
ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   130   9e-29
ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   130   1e-28
ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated pro...   130   1e-28

>emb|CAN83206.1| hypothetical protein VITISV_019937 [Vitis vinifera]
          Length = 566

 Score =  132 bits (332), Expect(2) = 3e-30
 Identities = 66/96 (68%), Positives = 73/96 (76%)
 Frame = -3

Query: 372 FGELTRRIWHTGNFKGQVSPHEFLQAVAVASQNKFVIGTQSDPVEFMSWLLKKLHADLIS 193
           FGELTR+IWH  NFKGQVSPHEFLQAV  AS+ +F IG QSDPVEFMSWLL  LH DL +
Sbjct: 280 FGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHGDLRT 339

Query: 192 ASKSTSIIQTCF*GELEVVTEIHNNSSTEKLENGYD 85
           + K++SII  CF GELEVV EI N    EK ENG D
Sbjct: 340 SKKNSSIIYNCFQGELEVVKEIPNKGFFEKRENGDD 375



 Score = 24.6 bits (52), Expect(2) = 3e-30
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -1

Query: 47  ESSNGALETCRMPFL 3
           E ++  LETCRMPFL
Sbjct: 384 EHADVILETCRMPFL 398


>ref|XP_003541464.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
           max]
          Length = 563

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/105 (65%), Positives = 78/105 (74%)
 Frame = -3

Query: 372 FGELTRRIWHTGNFKGQVSPHEFLQAVAVASQNKFVIGTQSDPVEFMSWLLKKLHADLIS 193
           FGELTR+IWHT NFKGQVSPHEFLQAV  AS+ +F IG QSDPVEFMSWLL  LHADL +
Sbjct: 278 FGELTRKIWHTRNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKT 337

Query: 192 ASKSTSIIQTCF*GELEVVTEIHNNSSTEKLENGYDPTYKGVCSR 58
           + K+TSII  CF GELEVV EI N   ++K EN  +    GV  R
Sbjct: 338 SKKNTSIIYECFQGELEVVKEIPNKVISDKKENNAEKLSDGVNER 382


>ref|XP_003535671.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine
           max]
          Length = 569

 Score =  130 bits (328), Expect = 9e-29
 Identities = 65/93 (69%), Positives = 73/93 (78%)
 Frame = -3

Query: 372 FGELTRRIWHTGNFKGQVSPHEFLQAVAVASQNKFVIGTQSDPVEFMSWLLKKLHADLIS 193
           FGELTR+IWH  NFKGQVSPHEFLQAV  AS+ +F IG QSDPVEFMSWLL  LHADL +
Sbjct: 279 FGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLKT 338

Query: 192 ASKSTSIIQTCF*GELEVVTEIHNNSSTEKLEN 94
           + K+TSII  CF GELEVV EI N   ++K EN
Sbjct: 339 SKKNTSIIYECFQGELEVVKEIPNKVISDKKEN 371


>ref|XP_004139540.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
           sativus]
          Length = 550

 Score =  130 bits (327), Expect = 1e-28
 Identities = 64/94 (68%), Positives = 72/94 (76%)
 Frame = -3

Query: 372 FGELTRRIWHTGNFKGQVSPHEFLQAVAVASQNKFVIGTQSDPVEFMSWLLKKLHADLIS 193
           FGELTR+IWH  NFKGQVSPHEFLQAV  AS+ +F IG QSDPVEFMSW L  LH++L  
Sbjct: 267 FGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRI 326

Query: 192 ASKSTSIIQTCF*GELEVVTEIHNNSSTEKLENG 91
             KS+SII  CF GELEVV EIH+ +  EK ENG
Sbjct: 327 TKKSSSIIYECFQGELEVVKEIHSKALIEKKENG 360


>ref|XP_004167152.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Cucumis
           sativus]
          Length = 550

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/94 (67%), Positives = 72/94 (76%)
 Frame = -3

Query: 372 FGELTRRIWHTGNFKGQVSPHEFLQAVAVASQNKFVIGTQSDPVEFMSWLLKKLHADLIS 193
           FGELTR+IWH  NFKGQVSPHEFLQA+  AS+ +F IG QSDPVEFMSW L  LH++L  
Sbjct: 267 FGELTRKIWHARNFKGQVSPHEFLQAIMKASKKRFRIGAQSDPVEFMSWFLNTLHSELRI 326

Query: 192 ASKSTSIIQTCF*GELEVVTEIHNNSSTEKLENG 91
             KS+SII  CF GELEVV EIH+ +  EK ENG
Sbjct: 327 TKKSSSIIYECFQGELEVVKEIHSKALIEKKENG 360


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