BLASTX nr result

ID: Coptis21_contig00036924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036924
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34918.3| unnamed protein product [Vitis vinifera]              115   3e-24
emb|CAN70191.1| hypothetical protein VITISV_016818 [Vitis vinifera]   115   5e-24
ref|XP_002279128.2| PREDICTED: transcription factor WER-like [Vi...   114   8e-24
ref|XP_002318045.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
dbj|BAH80548.1| transcription factor Myb [Eucalyptus grandis]         110   2e-22

>emb|CBI34918.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  115 bits (289), Expect = 3e-24
 Identities = 65/109 (59%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = -2

Query: 362 LSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDNQVKNLWNTHLSKKQLGVN 183
           LSPNVK+GDFT EEEDLI RLHKLLGNRWSLIAGRVPGRTDNQVKN WNTHLSKK LG+ 
Sbjct: 56  LSPNVKRGDFTAEEEDLIIRLHKLLGNRWSLIAGRVPGRTDNQVKNYWNTHLSKK-LGIK 114

Query: 182 KRKRKVGKPSSSRVPGDDDNRKEKDSNFMASGHDSNG---GSVELLVNE 45
           K+    G   SS +    + +K  +    +S   S G   G+ E   NE
Sbjct: 115 KKNN--GANVSSTLTNTREMQKGSEPLMNSSSSPSCGSSRGAAEAKANE 161


>emb|CAN70191.1| hypothetical protein VITISV_016818 [Vitis vinifera]
          Length = 216

 Score =  115 bits (287), Expect = 5e-24
 Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 LSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDNQVKNLWNTHLSKKQLGVN 183
           LSP+VK+GDF++EE+DLI RLH LLGNRWSLIAGRVPGRTDNQVKN WNTHLSKK LG+ 
Sbjct: 56  LSPSVKRGDFSQEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLSKK-LGIK 114

Query: 182 KRKRK-VGKPSSSRVPGDDDNRKEKDSNFMASGHDSNGGSVELLVNEFSQSVAETSNTNE 6
           K K K  G   +  +   + +    + +      D NG +   +  +  +S+   +NT +
Sbjct: 115 KHKSKSEGSSQAQSIEAKEAHSMPSNPDSKPPSEDKNGETGPXVREDLPRSMTMLANTQD 174

Query: 5   I 3
           +
Sbjct: 175 M 175


>ref|XP_002279128.2| PREDICTED: transcription factor WER-like [Vitis vinifera]
           gi|297733776|emb|CBI15023.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  114 bits (285), Expect = 8e-24
 Identities = 59/121 (48%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = -2

Query: 362 LSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDNQVKNLWNTHLSKKQLGVN 183
           LSP+VK+GDF++EE+DLI RLH LLGNRWSLIAGRVPGRTDNQVKN WNTHLSKK LG+ 
Sbjct: 56  LSPSVKRGDFSQEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLSKK-LGIK 114

Query: 182 KRKRK-VGKPSSSRVPGDDDNRKEKDSNFMASGHDSNGGSVELLVNEFSQSVAETSNTNE 6
           K K K  G   +  +   + +    + +      D NG +   +  +  +S+   +NT +
Sbjct: 115 KHKSKSEGSSQAQSIEAKEAHSMPSNPDSKPPSEDKNGETGPEVREDLPRSMTMLANTQD 174

Query: 5   I 3
           +
Sbjct: 175 M 175


>ref|XP_002318045.1| predicted protein [Populus trichocarpa] gi|222858718|gb|EEE96265.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  110 bits (276), Expect = 9e-23
 Identities = 61/121 (50%), Positives = 81/121 (66%), Gaps = 2/121 (1%)
 Frame = -2

Query: 362 LSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDNQVKNLWNTHLSKKQLGVN 183
           LSP+VK+G F+EEE+DLI RLHKLLGNRWSLIAGRVPGRTDNQVKN WNTHLSK+ LG+ 
Sbjct: 58  LSPSVKRGVFSEEEDDLIIRLHKLLGNRWSLIAGRVPGRTDNQVKNHWNTHLSKR-LGIK 116

Query: 182 KRKRKVGKPSS--SRVPGDDDNRKEKDSNFMASGHDSNGGSVELLVNEFSQSVAETSNTN 9
           ++K KV   SS  S   G +   K   ++     H+     +   + + S+ V E +++ 
Sbjct: 117 QKKCKVSASSSKFSEKLGANSRTKLSSNDEPILSHNGE-AEIHTEIQDNSEKVKEMTSSQ 175

Query: 8   E 6
           +
Sbjct: 176 D 176


>dbj|BAH80548.1| transcription factor Myb [Eucalyptus grandis]
          Length = 221

 Score =  110 bits (274), Expect = 2e-22
 Identities = 67/133 (50%), Positives = 78/133 (58%), Gaps = 17/133 (12%)
 Frame = -2

Query: 362 LSPNVKKGDFTEEEEDLITRLHKLLGNRWSLIAGRVPGRTDNQVKNLWNTHLSKKQLGVN 183
           LSP+VK+GDF+EEE+DLI RLH LLGNRWSLIAGRVPGRTDNQVKN WNTHLSK+ LG  
Sbjct: 57  LSPSVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNHWNTHLSKR-LGFK 115

Query: 182 KRKRKVG--KP---------------SSSRVPGDDDNRKEKDSNFMASGHDSNGGSVELL 54
           K K +    +P                SS  P   D+ +E     M     S G  VE  
Sbjct: 116 KGKGRADDHRPRTHLKKEKENHAMVLGSSLEPPSSDHLEETARKIMGDDKSSRGALVEC- 174

Query: 53  VNEFSQSVAETSN 15
             + SQ +A  SN
Sbjct: 175 --DSSQQLATPSN 185


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