BLASTX nr result

ID: Coptis21_contig00036907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036907
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
ref|XP_003521789.1| PREDICTED: F-box protein PP2-B1-like [Glycin...    70   1e-10
gb|ACU24548.1| unknown [Glycine max]                                   70   1e-10
gb|ACU24047.1| unknown [Glycine max]                                   70   1e-10
ref|NP_001241374.1| uncharacterized protein LOC100794576 [Glycin...    70   1e-10

>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = +3

Query: 3   SLKNAADSDVMWEKFLPSDYKEIISRSASPLDLNGFESKKELYFHLCAHPILLDGG 170
           + ++AA+SD +WEKFLP DY  IISRS+    L+ F SKK+LYF LC +PIL+D G
Sbjct: 41  TFRDAANSDTVWEKFLPQDYHSIISRSSDSFLLDRFSSKKQLYFSLCDNPILIDDG 96


>ref|XP_003521789.1| PREDICTED: F-box protein PP2-B1-like [Glycine max]
          Length = 317

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/56 (51%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   SLKNAADSDVMWEKFLPSDYKEIISRSASPLDLNGFESKKELYFHLCAHPILLDGG 170
           S ++A+ +D +WE+FLPSDY+ IIS+S+ P  L  + SKK+LY HLC +P+L+D G
Sbjct: 52  SFRSASVTDFVWERFLPSDYQAIISQSSKPSTLTNYSSKKDLYLHLCHNPLLIDAG 107


>gb|ACU24548.1| unknown [Glycine max]
          Length = 264

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/58 (53%), Positives = 44/58 (75%)
 Frame = +3

Query: 3   SLKNAADSDVMWEKFLPSDYKEIISRSASPLDLNGFESKKELYFHLCAHPILLDGGVM 176
           +L+++ADSD++W  F PSDY +I+SR+ +PL LN   S K L++ LC HP+LLDGG M
Sbjct: 30  TLRSSADSDLLWRTFFPSDYSDIVSRALNPLSLNSSSSYKRLFYALC-HPLLLDGGNM 86


>gb|ACU24047.1| unknown [Glycine max]
          Length = 252

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 29/56 (51%), Positives = 43/56 (76%)
 Frame = +3

Query: 3   SLKNAADSDVMWEKFLPSDYKEIISRSASPLDLNGFESKKELYFHLCAHPILLDGG 170
           S ++A+ +D +WE+FLPSDY+ IIS+S+ P  L  + SKK+LY HLC +P+L+D G
Sbjct: 52  SFRSASVTDFVWERFLPSDYQAIISQSSKPSTLTNYSSKKDLYLHLCHNPLLIDAG 107


>ref|NP_001241374.1| uncharacterized protein LOC100794576 [Glycine max]
           gi|255639812|gb|ACU20199.1| unknown [Glycine max]
          Length = 264

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/58 (53%), Positives = 44/58 (75%)
 Frame = +3

Query: 3   SLKNAADSDVMWEKFLPSDYKEIISRSASPLDLNGFESKKELYFHLCAHPILLDGGVM 176
           +L+++ADSD++W  F PSDY +I+SR+ +PL LN   S K L++ LC HP+LLDGG M
Sbjct: 30  TLRSSADSDLLWRTFFPSDYSDIVSRALNPLSLNSSSSYKHLFYALC-HPLLLDGGNM 86


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