BLASTX nr result

ID: Coptis21_contig00036891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036891
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
emb|CBI33853.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002277302.1| PREDICTED: cell cycle checkpoint protein RAD...   145   3e-33
emb|CAN64545.1| hypothetical protein VITISV_014888 [Vitis vinifera]   141   6e-32
ref|XP_004149108.1| PREDICTED: cell cycle checkpoint protein RAD...   140   1e-31

>ref|XP_002326739.1| predicted protein [Populus trichocarpa] gi|222834061|gb|EEE72538.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/85 (88%), Positives = 78/85 (91%)
 Frame = +1

Query: 1   VSYRYKYKFLRATTSNIPSSVIKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAA 180
           VSYRYKYKFLRATTSN+PSSV KDNRGSKLTIGRGGMLKVQHLVSVARPS  H +IDSA 
Sbjct: 219 VSYRYKYKFLRATTSNMPSSVTKDNRGSKLTIGRGGMLKVQHLVSVARPSTSHQHIDSAG 278

Query: 181 YQQPSRIAYIEFFVKPEVDEEPVND 255
           YQQPSRIAYIEFFVKPE DE+ VND
Sbjct: 279 YQQPSRIAYIEFFVKPEEDEDTVND 303


>emb|CBI33853.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/85 (84%), Positives = 77/85 (90%)
 Frame = +1

Query: 1   VSYRYKYKFLRATTSNIPSSVIKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAA 180
           VSYRYKYKFLRATTSNIPSSVI+DNRGSKLTIGRGGMLKVQHLVSVARPS  H ++DSA 
Sbjct: 214 VSYRYKYKFLRATTSNIPSSVIRDNRGSKLTIGRGGMLKVQHLVSVARPSIPHPHVDSAG 273

Query: 181 YQQPSRIAYIEFFVKPEVDEEPVND 255
           YQQPSRIAYIEFFVKPE  EE + +
Sbjct: 274 YQQPSRIAYIEFFVKPEEYEEDIQN 298


>ref|XP_002277302.1| PREDICTED: cell cycle checkpoint protein RAD1-like [Vitis vinifera]
          Length = 300

 Score =  145 bits (367), Expect = 3e-33
 Identities = 72/85 (84%), Positives = 77/85 (90%)
 Frame = +1

Query: 1   VSYRYKYKFLRATTSNIPSSVIKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAA 180
           VSYRYKYKFLRATTSNIPSSVI+DNRGSKLTIGRGGMLKVQHLVSVARPS  H ++DSA 
Sbjct: 214 VSYRYKYKFLRATTSNIPSSVIRDNRGSKLTIGRGGMLKVQHLVSVARPSIPHPHVDSAG 273

Query: 181 YQQPSRIAYIEFFVKPEVDEEPVND 255
           YQQPSRIAYIEFFVKPE  EE + +
Sbjct: 274 YQQPSRIAYIEFFVKPEEYEEDIQN 298


>emb|CAN64545.1| hypothetical protein VITISV_014888 [Vitis vinifera]
          Length = 294

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/85 (83%), Positives = 75/85 (88%)
 Frame = +1

Query: 1   VSYRYKYKFLRATTSNIPSSVIKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAA 180
           VSYR KYKFLRATTSNIPSSVI+DNRGSKLTIGRGGMLKVQHLVSVARPS  H + DSA 
Sbjct: 208 VSYRXKYKFLRATTSNIPSSVIRDNRGSKLTIGRGGMLKVQHLVSVARPSIPHPHXDSAG 267

Query: 181 YQQPSRIAYIEFFVKPEVDEEPVND 255
           YQQPSRIAYIEFFVKPE  EE + +
Sbjct: 268 YQQPSRIAYIEFFVKPEEYEEDIQN 292


>ref|XP_004149108.1| PREDICTED: cell cycle checkpoint protein RAD1-like [Cucumis
           sativus] gi|449526215|ref|XP_004170109.1| PREDICTED:
           cell cycle checkpoint protein RAD1-like [Cucumis
           sativus]
          Length = 301

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/79 (84%), Positives = 74/79 (93%)
 Frame = +1

Query: 1   VSYRYKYKFLRATTSNIPSSVIKDNRGSKLTIGRGGMLKVQHLVSVARPSNQHSYIDSAA 180
           VSYRYKYKFLRATTSNIPSSVI++NRGSKLTIGRGG+LKVQHLVSV +PS  H++IDSA 
Sbjct: 219 VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVGKPSTSHTHIDSAG 278

Query: 181 YQQPSRIAYIEFFVKPEVD 237
           YQQPSRIA+IEFFVKPE D
Sbjct: 279 YQQPSRIAFIEFFVKPEED 297


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