BLASTX nr result

ID: Coptis21_contig00036880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036880
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-...    93   3e-17
emb|CBI27404.3| unnamed protein product [Vitis vinifera]               93   3e-17
ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-...    82   4e-14
ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-14
ref|XP_002514580.1| DNA-3-methyladenine glycosylase, putative [R...    77   1e-12

>ref|XP_002267123.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Vitis vinifera]
          Length = 318

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 127 TSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQN-SMDIQDGNLKRCYWITKNSDKAYVQY 303
           T   R+  +SL R + PPE +E  V+++NV Q  S D+ DG LKRC WITKNSDK YVQ+
Sbjct: 70  TPLDRQIALSL-RLIGPPERREVPVAITNVPQQPSPDVGDGELKRCNWITKNSDKVYVQF 128

Query: 304 HDESWGVPVYDDIQLFELL 360
           HDE WGVPVY+D QLFELL
Sbjct: 129 HDECWGVPVYEDNQLFELL 147


>emb|CBI27404.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 127 TSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQN-SMDIQDGNLKRCYWITKNSDKAYVQY 303
           T   R+  +SL R + PPE +E  V+++NV Q  S D+ DG LKRC WITKNSDK YVQ+
Sbjct: 70  TPLDRQIALSL-RLIGPPERREVPVAITNVPQQPSPDVGDGELKRCNWITKNSDKVYVQF 128

Query: 304 HDESWGVPVYDDIQLFELL 360
           HDE WGVPVY+D QLFELL
Sbjct: 129 HDECWGVPVYEDNQLFELL 147


>ref|XP_004135425.1| PREDICTED: probable GMP synthase [glutamine-hydrolyzing]-like
           [Cucumis sativus] gi|449531521|ref|XP_004172734.1|
           PREDICTED: probable GMP synthase
           [glutamine-hydrolyzing]-like [Cucumis sativus]
          Length = 308

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 36/67 (53%), Positives = 47/67 (70%)
 Frame = +1

Query: 160 IRDLRPPEIKEKLVSVSNVGQNSMDIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYDD 339
           IR + PP  + ++    ++ Q S ++ DG L+RC WIT  SDKAYV +HDE WGVPVYDD
Sbjct: 81  IRLITPPPERREVPLPKSIQQQSQELSDGELRRCNWITHTSDKAYVSFHDECWGVPVYDD 140

Query: 340 IQLFELL 360
            +LFELL
Sbjct: 141 NRLFELL 147


>ref|XP_002314913.1| predicted protein [Populus trichocarpa] gi|222863953|gb|EEF01084.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 45/103 (43%), Positives = 61/103 (59%)
 Frame = +1

Query: 52  DSVPLNGNITPGDSSTPLSSAPMSPTSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQNSM 231
           DS   + +  P +    L+   +SP  R R+ P++  R+ +P + ++         Q + 
Sbjct: 66  DSSLTDSSAVPLEQKISLALRLISPLER-REVPVA--RNFQPQQQQQ---------QQNQ 113

Query: 232 DIQDGNLKRCYWITKNSDKAYVQYHDESWGVPVYDDIQLFELL 360
           D  DG +KRC WITKNSDK YV +HDE WGVPVYDD QLFELL
Sbjct: 114 DSNDGEVKRCNWITKNSDKVYVAFHDECWGVPVYDDNQLFELL 156


>ref|XP_002514580.1| DNA-3-methyladenine glycosylase, putative [Ricinus communis]
           gi|223546184|gb|EEF47686.1| DNA-3-methyladenine
           glycosylase, putative [Ricinus communis]
          Length = 319

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 42/94 (44%), Positives = 58/94 (61%)
 Frame = +1

Query: 79  TPGDSSTPLSSAPMSPTSRGRKTPMSLIRDLRPPEIKEKLVSVSNVGQNSMDIQDGNLKR 258
           TP D    L+   ++P  R R+ P +L R+++  + +++        Q S +   G ++R
Sbjct: 75  TPLDQKISLALRLITPLER-REVP-ALSRNVQQQQQQQQ--------QQSQESNGGEIRR 124

Query: 259 CYWITKNSDKAYVQYHDESWGVPVYDDIQLFELL 360
           C WITKNSDK YV +HDE WGVPVYDD QLFELL
Sbjct: 125 CNWITKNSDKVYVAFHDECWGVPVYDDNQLFELL 158


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