BLASTX nr result

ID: Coptis21_contig00036874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036874
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004167748.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    58   9e-07
ref|XP_004144071.1| PREDICTED: uncharacterized protein LOC101217...    58   9e-07
ref|XP_002864462.1| hypothetical protein ARALYDRAFT_495743 [Arab...    58   9e-07
ref|NP_200464.1| uncharacterized protein [Arabidopsis thaliana] ...    58   9e-07
ref|XP_002523418.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_004167748.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101217988,
           partial [Cucumis sativus]
          Length = 406

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = -3

Query: 133 PKRRVLWMQIGDGYAQGYWPFVFFSYLATSTSVI*RGGEIVNS 5
           PK    WMQ G+GY  GYWP   FSYLA S S+I  GGE+VNS
Sbjct: 299 PKEGHWWMQFGNGYVMGYWPSFLFSYLADSASMIEWGGEVVNS 341


>ref|XP_004144071.1| PREDICTED: uncharacterized protein LOC101217988 [Cucumis sativus]
          Length = 422

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/43 (60%), Positives = 29/43 (67%)
 Frame = -3

Query: 133 PKRRVLWMQIGDGYAQGYWPFVFFSYLATSTSVI*RGGEIVNS 5
           PK    WMQ G+GY  GYWP   FSYLA S S+I  GGE+VNS
Sbjct: 299 PKEGHWWMQFGNGYVMGYWPSFLFSYLADSASMIEWGGEVVNS 341


>ref|XP_002864462.1| hypothetical protein ARALYDRAFT_495743 [Arabidopsis lyrata subsp.
           lyrata] gi|297310297|gb|EFH40721.1| hypothetical protein
           ARALYDRAFT_495743 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/42 (59%), Positives = 28/42 (66%)
 Frame = -3

Query: 133 PKRRVLWMQIGDGYAQGYWPFVFFSYLATSTSVI*RGGEIVN 8
           PK    WMQ GDGY  GYWP   FSYLA S S++  GGE+VN
Sbjct: 298 PKEGHWWMQFGDGYVLGYWPSFLFSYLADSASIVEWGGEVVN 339


>ref|NP_200464.1| uncharacterized protein [Arabidopsis thaliana]
           gi|334188448|ref|NP_001190555.1| uncharacterized protein
           [Arabidopsis thaliana] gi|8809628|dbj|BAA97179.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|17381170|gb|AAL36397.1| unknown protein [Arabidopsis
           thaliana] gi|23296886|gb|AAN13196.1| unknown protein
           [Arabidopsis thaliana] gi|332009394|gb|AED96777.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332009395|gb|AED96778.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 420

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/42 (59%), Positives = 28/42 (66%)
 Frame = -3

Query: 133 PKRRVLWMQIGDGYAQGYWPFVFFSYLATSTSVI*RGGEIVN 8
           PK    WMQ GDGY  GYWP   FSYLA S S++  GGE+VN
Sbjct: 297 PKEGHWWMQFGDGYVLGYWPSFLFSYLADSASIVEWGGEVVN 338


>ref|XP_002523418.1| conserved hypothetical protein [Ricinus communis]
           gi|223537368|gb|EEF38997.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 412

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/52 (51%), Positives = 31/52 (59%)
 Frame = -3

Query: 160 SNAPIGLSGPKRRVLWMQIGDGYAQGYWPFVFFSYLATSTSVI*RGGEIVNS 5
           S   I +  PK    WMQ G+ Y  GYWP   FSYLA S S+I  GGE+VNS
Sbjct: 280 SQYDISILDPKEGHWWMQFGNDYVLGYWPSFLFSYLADSASMIEWGGEVVNS 331


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