BLASTX nr result

ID: Coptis21_contig00036870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036870
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19051.3| unnamed protein product [Vitis vinifera]              166   2e-39
ref|XP_002966336.1| hypothetical protein SELMODRAFT_85583 [Selag...   147   1e-33
dbj|BAE45868.1| penicillin-binding protein [Physcomitrella paten...   146   1e-33
ref|XP_001771453.1| penicillin-binding protein [Physcomitrella p...   146   1e-33
gb|EKD83082.1| hypothetical protein ACD_39C00899G0001, partial [...   122   4e-26

>emb|CBI19051.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  166 bits (419), Expect = 2e-39
 Identities = 81/108 (75%), Positives = 91/108 (84%)
 Frame = +2

Query: 14  YPSHLFKAIVAYEDRRFFWHCGVDPVGVARAVLLFPKGGGGSTITQQLVKNTFLTNDRTF 193
           YPSHL+KAIVAYEDRRFF H GVDPVG+ARA L     GGGSTITQQLVKNT L N+RTF
Sbjct: 126 YPSHLWKAIVAYEDRRFFSHFGVDPVGIARAALSLSALGGGSTITQQLVKNTCLKNERTF 185

Query: 194 SRKAIEMLLALILERKLSKSKILCSYLSKIYWGHGVYGIESASNFYFG 337
           SRK +EM+LAL LER +SK +IL  Y+SKIYWGHG+YG+ESAS FYFG
Sbjct: 186 SRKIVEMVLALALERTISKWRILSLYMSKIYWGHGIYGVESASIFYFG 233


>ref|XP_002966336.1| hypothetical protein SELMODRAFT_85583 [Selaginella moellendorffii]
           gi|300165756|gb|EFJ32363.1| hypothetical protein
           SELMODRAFT_85583 [Selaginella moellendorffii]
          Length = 918

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/107 (64%), Positives = 89/107 (83%)
 Frame = +2

Query: 17  PSHLFKAIVAYEDRRFFWHCGVDPVGVARAVLLFPKGGGGSTITQQLVKNTFLTNDRTFS 196
           PS +++A+VA EDRRFF H G+DP G++RAVL     GGGSTITQQLVKN FLTN+R +S
Sbjct: 194 PSAMWQAVVASEDRRFFEHHGIDPRGISRAVLTLSSSGGGSTITQQLVKNLFLTNERKWS 253

Query: 197 RKAIEMLLALILERKLSKSKILCSYLSKIYWGHGVYGIESASNFYFG 337
           RKA+E++LAL+LE+++SK  IL  YL KIYWGHGVYG+++A+ FYFG
Sbjct: 254 RKAVEIILALLLEKRMSKWDILRLYLDKIYWGHGVYGLKAAAAFYFG 300


>dbj|BAE45868.1| penicillin-binding protein [Physcomitrella patens]
           gi|76880196|dbj|BAE45869.1| penicillin-binding protein
           [Physcomitrella patens]
          Length = 936

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/107 (66%), Positives = 86/107 (80%)
 Frame = +2

Query: 17  PSHLFKAIVAYEDRRFFWHCGVDPVGVARAVLLFPKGGGGSTITQQLVKNTFLTNDRTFS 196
           PS L++A+VA EDRRFF H G+DP G+ RA+L     GGGSTITQQLVKN FLTNDR +S
Sbjct: 208 PSMLWQAVVASEDRRFFEHQGIDPRGLTRAILSLASSGGGSTITQQLVKNVFLTNDRKWS 267

Query: 197 RKAIEMLLALILERKLSKSKILCSYLSKIYWGHGVYGIESASNFYFG 337
           RK +EM+LA++LER++SK  IL  YL+KIYWGHGVYGIE A+  YFG
Sbjct: 268 RKFMEMILAILLERQMSKWDILHHYLNKIYWGHGVYGIEGAAALYFG 314


>ref|XP_001771453.1| penicillin-binding protein [Physcomitrella patens subsp. patens]
           gi|162677180|gb|EDQ63653.1| penicillin-binding protein
           [Physcomitrella patens subsp. patens]
          Length = 900

 Score =  146 bits (369), Expect = 1e-33
 Identities = 71/107 (66%), Positives = 86/107 (80%)
 Frame = +2

Query: 17  PSHLFKAIVAYEDRRFFWHCGVDPVGVARAVLLFPKGGGGSTITQQLVKNTFLTNDRTFS 196
           PS L++A+VA EDRRFF H G+DP G+ RA+L     GGGSTITQQLVKN FLTNDR +S
Sbjct: 208 PSMLWQAVVASEDRRFFEHQGIDPRGLTRAILSLASSGGGSTITQQLVKNVFLTNDRKWS 267

Query: 197 RKAIEMLLALILERKLSKSKILCSYLSKIYWGHGVYGIESASNFYFG 337
           RK +EM+LA++LER++SK  IL  YL+KIYWGHGVYGIE A+  YFG
Sbjct: 268 RKFMEMILAILLERQMSKWDILHHYLNKIYWGHGVYGIEGAAALYFG 314


>gb|EKD83082.1| hypothetical protein ACD_39C00899G0001, partial [uncultured
           bacterium]
          Length = 688

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/115 (51%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
 Frame = +2

Query: 5   ARNYPSHLFKAIVAYEDRRFFWHCGVDPVGVARAVLLFPKGG----GGSTITQQLVKNTF 172
           ++  P+H+  A+VA ED RF+ H G+D VG+ RA++   + G    G ST+TQQLVKN F
Sbjct: 104 SQEIPAHMKSAVVAIEDERFYSHYGIDIVGITRAMVKNVQAGRVVQGASTLTQQLVKNAF 163

Query: 173 LTNDRTFSRKAIEMLLALILERKLSKSKILCSYLSKIYWGHGVYGIESASNFYFG 337
           LT+++TF RKAIE ++A  LERK SK +IL  YL++IY+GHG YG+ +A+  YFG
Sbjct: 164 LTSEKTFKRKAIEAMMAFQLERKYSKEEILTLYLNEIYFGHGAYGLAAAAEIYFG 218


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