BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036860
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   218   3e-55
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   177   6e-43
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   167   8e-40

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  218 bits (556), Expect = 3e-55
 Identities = 109/151 (72%), Positives = 125/151 (82%)
 Frame = +3

Query: 27  IPCYATLSTLMLRFADKKLFSQAQAIWDEIINSSIVPNMKVVSHLMDAYGKMGHFDEVVR 206
           +P  +TLS LML +AD  LF +AQA+WDEIINSS  PN+++VS L+DAYGKMGHF EV R
Sbjct: 87  LPNNSTLSALMLCYADNGLFPKAQALWDEIINSSFGPNIQIVSKLIDAYGKMGHFGEVTR 146

Query: 207 ILHEVISRDFSLCSEAYSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYS 386
           ILH+V SRDF+   E YS AISCFGK GQLEMME+ L +MVS G PVDSATGNAF+RYYS
Sbjct: 147 ILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALKEMVSRGFPVDSATGNAFIRYYS 206

Query: 387 IFGSLTEMEVAYGRFKRSRILIEEEGIRAMA 479
           IFGSLTEME AY R K+SRILIEEEGIRAM+
Sbjct: 207 IFGSLTEMEAAYDRLKKSRILIEEEGIRAMS 237


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  177 bits (450), Expect = 6e-43
 Identities = 87/146 (59%), Positives = 111/146 (76%)
 Frame = +3

Query: 42  TLSTLMLRFADKKLFSQAQAIWDEIINSSIVPNMKVVSHLMDAYGKMGHFDEVVRILHEV 221
           TLS ++L +AD  L  QAQAIW  ++N S  P++++VS L+DAY K GHF+EV+ IL ++
Sbjct: 96  TLSAILLCYADNGLLPQAQAIWKHMLNGSFTPSIQIVSRLIDAYSKKGHFNEVMNILDQL 155

Query: 222 ISRDFSLCSEAYSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSIFGSL 401
              +FSL  EAYS AISCFGK GQL++ME+ L DMV  G PVD ATGNAF+RYYSI GSL
Sbjct: 156 SYSNFSLLHEAYSLAISCFGKGGQLQLMENALKDMVLRGFPVDYATGNAFIRYYSIHGSL 215

Query: 402 TEMEVAYGRFKRSRILIEEEGIRAMA 479
           T+ME AY R KRSR L++ EGIRA++
Sbjct: 216 TDMESAYSRLKRSRHLVDREGIRAVS 241


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/147 (59%), Positives = 113/147 (76%)
 Frame = +3

Query: 39  ATLSTLMLRFADKKLFSQAQAIWDEIINSSIVPNMKVVSHLMDAYGKMGHFDEVVRILHE 218
           +TLST+M+ + D     QAQA+W+E++NS   P+++V+S L +AYGKMGHFD + ++L +
Sbjct: 56  STLSTIMVHYIDDGSPLQAQAMWEEMLNSCFEPSVQVISKLFNAYGKMGHFDYITKVLDQ 115

Query: 219 VISRDFSLCSEAYSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSIFGS 398
           V  R   L  EAYS AISCFGK  QLE+MESTL +MVSSG  V+SATGN+F+ YYS+FGS
Sbjct: 116 VKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNSATGNSFIIYYSMFGS 175

Query: 399 LTEMEVAYGRFKRSRILIEEEGIRAMA 479
           L EME AYGR KRSR LIE++GI AMA
Sbjct: 176 LVEMETAYGRLKRSRFLIEKKGIMAMA 202


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  174 bits (442), Expect = 5e-42
 Identities = 91/152 (59%), Positives = 112/152 (73%), Gaps = 1/152 (0%)
 Frame = +3

Query: 27  IPCYATLSTLMLRFADKKLFSQAQAIWDEIINSSIVPNMKVVSHLMDAYGKMGHFDEVVR 206
           +P   TLS +ML +AD  L  QAQAIW+E++ SS VP+++V+S L+D Y K G FDEV++
Sbjct: 91  LPDNRTLSAMMLCYADSGLLPQAQAIWEEMLYSSFVPSVQVISDLIDIYAKSGLFDEVIK 150

Query: 207 ILHEVIS-RDFSLCSEAYSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYY 383
           IL ++ S R F    + YS AISCFGK GQLE+ME TL  MVS G  VDSATGNAF+ YY
Sbjct: 151 ILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELMEDTLKKMVSKGFWVDSATGNAFVVYY 210

Query: 384 SIFGSLTEMEVAYGRFKRSRILIEEEGIRAMA 479
           S+ GSL EME AY R KRSR+LIE EGIRAM+
Sbjct: 211 SLHGSLAEMEAAYDRLKRSRLLIEREGIRAMS 242


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  167 bits (423), Expect = 8e-40
 Identities = 90/156 (57%), Positives = 105/156 (67%)
 Frame = +3

Query: 12  LGSKEIPCYATLSTLMLRFADKKLFSQAQAIWDEIINSSIVPNMKVVSHLMDAYGKMGHF 191
           L  K +P  A      ++  D  LF +AQA+WDEIINSS  PN+++VS L+DAYGKMGHF
Sbjct: 127 LSRKRLPHVAQELLFEMKSEDNGLFPKAQALWDEIINSSFGPNIQIVSKLIDAYGKMGHF 186

Query: 192 DEVVRILHEVISRDFSLCSEAYSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAF 371
            EV RILH+                       GQLEMME+ L +MVS G PVDSATGNAF
Sbjct: 187 GEVTRILHQ----------------------GGQLEMMENALKEMVSRGFPVDSATGNAF 224

Query: 372 LRYYSIFGSLTEMEVAYGRFKRSRILIEEEGIRAMA 479
           +RYYSIFGSLTEME AY R K+SRILIEEEGIRAM+
Sbjct: 225 IRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMS 260