BLASTX nr result

ID: Coptis21_contig00036856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036856
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309313.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
emb|CBI25595.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002265610.1| PREDICTED: uncharacterized protein LOC100263...    59   5e-07
emb|CAN78870.1| hypothetical protein VITISV_024969 [Vitis vinifera]    59   5e-07
ref|XP_002324573.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002309313.1| predicted protein [Populus trichocarpa] gi|222855289|gb|EEE92836.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
 Frame = -3

Query: 394 DSTRWVSFDDNSENYHPNLFASQDQ-SSAFTTNYTTNGSSTKWFAPSSF-LSGNDGDNMR 221
           +S RW +F+D+ ENYHPNLF+ QD  S     N+T       +  P S   S N+GD MR
Sbjct: 464 NSMRWTTFEDDDENYHPNLFSQQDHYSFPKGQNFTARNDHRAYTNPFSHDYSENNGDKMR 523

Query: 220 TESAFSHDYNPFWSPK 173
           TES      NPFW P+
Sbjct: 524 TESF----QNPFWIPR 535


>emb|CBI25595.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
 Frame = -3

Query: 409 RDKQEDSTRWVSFDDNSENYHPNLFASQDQS----------SAFTTNYTTN--GSSTKWF 266
           R+K+  STRW +F+D+ EN HPNLFA QD S          S    +Y +N   S+TK F
Sbjct: 426 REKRGHSTRWTTFEDD-ENCHPNLFAHQDHSFQMKQTKLAPSKEDYSYISNIDSSNTKCF 484

Query: 265 APSSFL---SGNDGDNMRTESAFSHD--YNPFWSPK 173
             + F    S   G+  R+E  F  D   NPFWSPK
Sbjct: 485 ENNPFFHDYSDGRGEKPRSELGFYQDQNQNPFWSPK 520


>ref|XP_002265610.1| PREDICTED: uncharacterized protein LOC100263642 [Vitis vinifera]
          Length = 554

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
 Frame = -3

Query: 409 RDKQEDSTRWVSFDDNSENYHPNLFASQDQS----------SAFTTNYTTN--GSSTKWF 266
           R+K+  STRW +F+D+ EN HPNLFA QD S          S    +Y +N   S+TK F
Sbjct: 453 REKRGHSTRWTTFEDD-ENCHPNLFAHQDHSFQMKQTKLAPSKEDYSYISNIDSSNTKCF 511

Query: 265 APSSFL---SGNDGDNMRTESAFSHD--YNPFWSPK 173
             + F    S   G+  R+E  F  D   NPFWSPK
Sbjct: 512 ENNPFFHDYSDGRGEKPRSELGFYQDQNQNPFWSPK 547


>emb|CAN78870.1| hypothetical protein VITISV_024969 [Vitis vinifera]
          Length = 110

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 17/96 (17%)
 Frame = -3

Query: 409 RDKQEDSTRWVSFDDNSENYHPNLFASQDQS----------SAFTTNYTTN--GSSTKWF 266
           R+K+  STRW +F+D+ EN HPNLFA QD S          S    +Y +N   S+TK F
Sbjct: 9   REKRGHSTRWTTFEDD-ENCHPNLFAHQDHSFQMKQTKLAPSKEDYSYISNIDSSNTKCF 67

Query: 265 APSSFL---SGNDGDNMRTESAFSHD--YNPFWSPK 173
             + F    S   G+  R+E  F  D   NPFWSPK
Sbjct: 68  ENNPFFHDYSDGRGEKPRSELGFYQDQNQNPFWSPK 103


>ref|XP_002324573.1| predicted protein [Populus trichocarpa] gi|222866007|gb|EEF03138.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
 Frame = -3

Query: 394 DSTRWVSFDDNSENYHPNLFASQDQS-SAFTTNYTTNGSSTKWFAPSSF-LSGNDGDNMR 221
           +S RW +F+D  EN HPNLF+ QD S      N+T     + +  P S   S ++G+ +R
Sbjct: 473 NSMRWTTFEDEDENCHPNLFSQQDHSFPKKQQNFTAKNDQSAYTNPFSHDYSESNGNKLR 532

Query: 220 TESAFSHDYNPFWSPK 173
           TES      NPFW P+
Sbjct: 533 TESF----QNPFWIPR 544


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