BLASTX nr result

ID: Coptis21_contig00036836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036836
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
 Frame = +1

Query: 22  GWLLTVNRNGAVGMFHPLSKSIVSLPVMETLPSIP---------NIIKGFFSNGIDVYRR 174
           GWL+ V  + ++ + +PL++  + LP + T    P         N+ + F        R 
Sbjct: 96  GWLIMVEDSPSIFLLNPLTRERIELPALSTFSIFPTDVVFENSRNLNENFIMREKFHIRD 155

Query: 175 CCILKGVMSS-PNPKTARLIVVIYGEEKVLAFCRPGKEATWIDFESKGEVRSRGFSDICF 351
             I+K ++SS P+  T  + VVIYG  + LAFCR G  A  +  E+    R         
Sbjct: 156 TFIVKAILSSDPSLDTNFMAVVIYGVNENLAFCRSGDAAWTVIDETTSPPR--------- 206

Query: 352 FGRFLYAVTDNGKVFRAFETGGTS 423
             R+  A+   GK+F   +TGG S
Sbjct: 207 --RYKDALFRAGKLFAVDQTGGIS 228


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