BLASTX nr result

ID: Coptis21_contig00036835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036835
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55551.1| mutator-like transposase [Rosa rugosa]                  71   1e-10
ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258...    57   2e-06
ref|XP_003563589.1| PREDICTED: uncharacterized protein LOC100844...    57   2e-06
ref|XP_002332013.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002319648.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>gb|AFP55551.1| mutator-like transposase [Rosa rugosa]
          Length = 721

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/94 (37%), Positives = 50/94 (53%)
 Frame = +3

Query: 6   GLLVNIPLVFPGSYHSFCYWHMENNLRTALSKKCGVTKVLVALFKKCAYAATHEKFEEHM 185
           GL+   P VFP + H FC+ H+ +NL         +   +  LF  CAY+ T E +E +M
Sbjct: 417 GLVSAFPRVFPNNPHGFCFRHLMSNLSDKFPAGSYLKDRIPYLFMCCAYSRTSEMYEFNM 476

Query: 186 AEFKEIGGDAISNFLNRVPYEYWANAYFCGARYG 287
              +  GGD ++ FL  +P E W  AYF G R+G
Sbjct: 477 EILRSEGGDIVAQFLEDLPKENWCMAYFNGERFG 510


>ref|XP_002262784.1| PREDICTED: uncharacterized protein LOC100258751 [Vitis vinifera]
           gi|147858253|emb|CAN83921.1| hypothetical protein
           VITISV_011842 [Vitis vinifera]
          Length = 749

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/94 (32%), Positives = 51/94 (54%)
 Frame = +3

Query: 6   GLLVNIPLVFPGSYHSFCYWHMENNLRTALSKKCGVTKVLVALFKKCAYAATHEKFEEHM 185
           G++  +   FP ++H FC  H+ ++ R   +       +LV L  + A+A T  +FE  +
Sbjct: 443 GIVDGVEANFPTAFHGFCMRHLSDSFRKEFNNT-----MLVNLLWEAAHALTVIEFEAKI 497

Query: 186 AEFKEIGGDAISNFLNRVPYEYWANAYFCGARYG 287
            E +EI  DA + ++ R+P   WA AYF G R+G
Sbjct: 498 LEIEEISQDA-AYWIRRIPPRLWATAYFEGTRFG 530


>ref|XP_003563589.1| PREDICTED: uncharacterized protein LOC100844444 [Brachypodium
           distachyon]
          Length = 733

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = +3

Query: 3   HGLLVNIPLVFPGSYHSFCYWHMENNLRTALSKKC--GVTKVLVALFKKCAYAATHEKFE 176
           +GL   +PLVFP S+H +C   +    +  L       V   +V L KK  Y+ T ++F 
Sbjct: 407 NGLWDEVPLVFPESHHGYCVDFLIEEFKMQLEDAWIEEVRDAMVELCKKAIYSCTADEFN 466

Query: 177 EHMAEFKEIGGDAISNFLNRVPYEYWANAYFCGARYG 287
           +H+ E +    D ++ +L  +  E W++A+F G+R+G
Sbjct: 467 QHIEEIRS-ESDKLAEWLLEIKPERWSDAFFKGSRHG 502


>ref|XP_002332013.1| predicted protein [Populus trichocarpa] gi|222875238|gb|EEF12369.1|
           predicted protein [Populus trichocarpa]
          Length = 572

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/94 (32%), Positives = 50/94 (53%)
 Frame = +3

Query: 6   GLLVNIPLVFPGSYHSFCYWHMENNLRTALSKKCGVTKVLVALFKKCAYAATHEKFEEHM 185
           G++  +   FP ++H FC  H+  + R   +       +LV L  + A+A T  +FE  +
Sbjct: 269 GIVDGVEANFPTAFHGFCMRHLSESFRKEFNNT-----MLVNLLWEAAHALTVIEFEAKI 323

Query: 186 AEFKEIGGDAISNFLNRVPYEYWANAYFCGARYG 287
            E +EI  DA + ++ R+P   WA AYF G R+G
Sbjct: 324 LEIEEISQDA-AYWIRRIPPRLWATAYFEGTRFG 356


>ref|XP_002319648.1| predicted protein [Populus trichocarpa] gi|222858024|gb|EEE95571.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/94 (31%), Positives = 50/94 (53%)
 Frame = +3

Query: 6   GLLVNIPLVFPGSYHSFCYWHMENNLRTALSKKCGVTKVLVALFKKCAYAATHEKFEEHM 185
           G++  +   FP ++H FC  H+  + R   +       +LV L  + A+A T  +FE  +
Sbjct: 275 GIVDGVEANFPTAFHGFCMRHLSESFRKEFNNT-----MLVNLLWEAAHALTVIEFEAKI 329

Query: 186 AEFKEIGGDAISNFLNRVPYEYWANAYFCGARYG 287
            E +E+  DA + ++ R+P   WA AYF G R+G
Sbjct: 330 LEIEEVSQDA-AYWIRRIPPRLWATAYFEGTRFG 362


Top