BLASTX nr result
ID: Coptis21_contig00036828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00036828
(798 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002877272.1| pectinesterase family protein [Arabidopsis l... 327 1e-87
ref|NP_189913.3| pectinesterase 32 [Arabidopsis thaliana] gi|753... 326 3e-87
gb|AER38245.1| PME4 [Gossypium barbadense] 323 4e-86
sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesteras... 317 2e-84
gb|AER38246.1| PME3 [Gossypium barbadense] 314 2e-83
>ref|XP_002877272.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323110|gb|EFH53531.1| pectinesterase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 527
Score = 327 bits (839), Expect = 1e-87
Identities = 162/281 (57%), Positives = 206/281 (73%), Gaps = 15/281 (5%)
Frame = +1
Query: 1 LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
LKVP F + K+ +D ++ A +IVSKF K SR+ NAI DCVDLLD A+ELS +
Sbjct: 40 LKVPPLEFAQAAKTVVDAIQKAVAIVSKFDKKVGKSRVSNAILDCVDLLDSAAEELSWII 99
Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
SA +NPNG DNSTGD G DL+ W+SAAL NQ+TCLDGFEGTN +KK++ G L +V + V
Sbjct: 100 SASQNPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSRVGTTV 159
Query: 361 ANVLGMVGQVPSNKNSPRD---------------FPAWMKPGDRRLLQAPTXXXXXXXXX 495
N+L MV PS K P+ FP+W+KPGDR+LLQ
Sbjct: 160 RNLLTMVHSPPS-KAKPKPIKAHTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVA 218
Query: 496 XMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATII 675
DG+G+F+++ DA+LAAPDYST+RYVI+VKRGVY+ENV+IKKKKWN+M++GDG+DAT+I
Sbjct: 219 T-DGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYEENVEIKKKKWNIMIVGDGIDATVI 277
Query: 676 SGNRNFVDGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
+GNR+F+DGWTTFRSATFAVS +GFI RDI+F+NTAGPEKH
Sbjct: 278 TGNRSFIDGWTTFRSATFAVSGRGFIGRDITFQNTAGPEKH 318
>ref|NP_189913.3| pectinesterase 32 [Arabidopsis thaliana]
gi|75335617|sp|Q9LXK7.1|PME32_ARATH RecName:
Full=Probable pectinesterase/pectinesterase inhibitor
32; Includes: RecName: Full=Pectinesterase inhibitor 32;
AltName: Full=Pectin methylesterase inhibitor 32;
Includes: RecName: Full=Pectinesterase 32; Short=PE 32;
AltName: Full=Pectin methylesterase 32; Short=AtPME32;
Flags: Precursor gi|7649367|emb|CAB89048.1|
pectinesterase-like protein [Arabidopsis thaliana]
gi|17979141|gb|AAL49828.1| putative pectinesterase
[Arabidopsis thaliana] gi|20465719|gb|AAM20328.1|
putative pectinesterase [Arabidopsis thaliana]
gi|332644260|gb|AEE77781.1| pectinesterase 32
[Arabidopsis thaliana]
Length = 527
Score = 326 bits (836), Expect = 3e-87
Identities = 163/281 (58%), Positives = 205/281 (72%), Gaps = 15/281 (5%)
Frame = +1
Query: 1 LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
L+VP F + K+ +D + A +IVSKF K SR+ NAI DCVDLLD A+ELS +
Sbjct: 40 LRVPPLEFAEAAKTVVDAITKAVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWII 99
Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
SA ++PNG DNSTGD G DL+ W+SAAL NQ+TCLDGFEGTN +KK++ G L KV + V
Sbjct: 100 SASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTV 159
Query: 361 ANVLGMVGQVPSNKNSPRD---------------FPAWMKPGDRRLLQAPTXXXXXXXXX 495
N+L MV PS K P+ FP+W+KPGDR+LLQ
Sbjct: 160 RNLLTMVHSPPS-KPKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVA 218
Query: 496 XMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATII 675
DG+G+F+++ DA+LAAPDYST+RYVI+VKRGVY ENV+IKKKKWN+MM+GDG+DAT+I
Sbjct: 219 A-DGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVI 277
Query: 676 SGNRNFVDGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
+GNR+F+DGWTTFRSATFAVS +GFIARDI+F+NTAGPEKH
Sbjct: 278 TGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKH 318
>gb|AER38245.1| PME4 [Gossypium barbadense]
Length = 525
Score = 323 bits (827), Expect = 4e-86
Identities = 166/283 (58%), Positives = 206/283 (72%), Gaps = 17/283 (6%)
Frame = +1
Query: 1 LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
LKVP+ F+ S+K+TID ++ ATS+VS+F F + RL NAI+DC+DLLD +ADELS T+
Sbjct: 36 LKVPATEFIGSLKTTIDAIRKATSVVSQFGGFFHDFRLSNAISDCLDLLDSSADELSWTM 95
Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
SA +NPN DNSTGD DL+ WLSAA+ NQ+TC+DGFEGTNS VK V+ GSL ++TS V
Sbjct: 96 SASQNPNAKDNSTGDLSSDLRTWLSAAMVNQQTCIDGFEGTNSMVKTVVSGSLNQITSLV 155
Query: 361 ANVLGMVGQVPSNK-NSPRD----------------FPAWMKPGDRRLLQAPTXXXXXXX 489
N+L MV P++K N R+ FP W K DRRLLQ
Sbjct: 156 RNLLIMVHPGPNSKSNGTRNGSQKGGGGGGHPGQSRFPVWFKREDRRLLQI--NGVTANV 213
Query: 490 XXXMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDAT 669
DGSG+F+ +MDA+ APD S RYVIY+K+G+YKENV+IKKKKWNL+MIGDGMD T
Sbjct: 214 VVAADGSGNFTRIMDAVETAPDKSMNRYVIYIKKGLYKENVEIKKKKWNLVMIGDGMDVT 273
Query: 670 IISGNRNFVDGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
+ISGNR+F+DGWTT RSATFAVS +GFIARDI+FENTAGP+KH
Sbjct: 274 VISGNRSFIDGWTTLRSATFAVSGRGFIARDITFENTAGPQKH 316
>sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;
Includes: RecName: Full=Pectinesterase inhibitor PPE8B;
AltName: Full=Pectin methylesterase inhibitor PPE8B;
Includes: RecName: Full=Pectinesterase PPE8B; Short=PE
PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags:
Precursor gi|1213629|emb|CAA65237.1| pectinesterase
[Prunus persica]
Length = 522
Score = 317 bits (812), Expect = 2e-84
Identities = 162/266 (60%), Positives = 198/266 (74%)
Frame = +1
Query: 1 LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
LKV + F S+K TID V+ SI+S+F N F + RL NAI+DC+DLLD++ADEL+ +L
Sbjct: 49 LKVSATEFAGSLKDTIDAVQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSL 108
Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
SA +N G +NSTG DL+ WLSAAL NQ+TC +GFEGTNS V+ +I L +VTS V
Sbjct: 109 SASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLV 168
Query: 361 ANVLGMVGQVPSNKNSPRDFPAWMKPGDRRLLQAPTXXXXXXXXXXMDGSGSFSSVMDAI 540
+L V + + P+W+K DR+LLQA DG+G+F++V DA+
Sbjct: 169 QELLTQVHPNSNQQGPNGQIPSWVKTKDRKLLQAD--GVSVDAIVAQDGTGNFTNVTDAV 226
Query: 541 LAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATIISGNRNFVDGWTTFRS 720
LAAPDYS RRYVIY+KRG YKENV+IKKKKWNLMMIGDGMDATIISGNR+FVDGWTTFRS
Sbjct: 227 LAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRS 286
Query: 721 ATFAVSAKGFIARDISFENTAGPEKH 798
ATFAVS +GFIARDI+FENTAGPEKH
Sbjct: 287 ATFAVSGRGFIARDITFENTAGPEKH 312
>gb|AER38246.1| PME3 [Gossypium barbadense]
Length = 514
Score = 314 bits (804), Expect = 2e-83
Identities = 156/274 (56%), Positives = 205/274 (74%), Gaps = 8/274 (2%)
Frame = +1
Query: 1 LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
+ VP A F S+++TID ++ IVS+F + F + RL NAI+DC+DLLD++AD+LS +L
Sbjct: 34 VNVPPAEFAGSLRTTIDAIRKVIPIVSQFGSFFGDFRLSNAISDCLDLLDFSADQLSWSL 93
Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
SA +NPNG NSTGD DL+ WLSAA+ NQETC++GFEGTN K V+ G L +VTS V
Sbjct: 94 SASQNPNGKHNSTGDVASDLRTWLSAAMANQETCIEGFEGTNGIAKTVVAGGLNQVTSLV 153
Query: 361 ANVLGMVGQVPSNKNSPRD--------FPAWMKPGDRRLLQAPTXXXXXXXXXXMDGSGS 516
+++L MV S+ S D FP+W + D++LLQA +DG+G+
Sbjct: 154 SDLLTMVQPPGSDSRSNGDRKVAEKNRFPSWFEREDQKLLQA--NGVTADAVVALDGTGT 211
Query: 517 FSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATIISGNRNFV 696
F+++MDA+ AAPDYS R+VIY+K+G+YKENV+IKKKKWNLMM+GDG++ TIISGNR+FV
Sbjct: 212 FTNIMDAVAAAPDYSMNRHVIYIKKGLYKENVEIKKKKWNLMMVGDGINGTIISGNRSFV 271
Query: 697 DGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
DGWTTFRSATFAVS +GFIARDI+FENTAGP+KH
Sbjct: 272 DGWTTFRSATFAVSGRGFIARDITFENTAGPQKH 305