BLASTX nr result

ID: Coptis21_contig00036828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036828
         (798 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002877272.1| pectinesterase family protein [Arabidopsis l...   327   1e-87
ref|NP_189913.3| pectinesterase 32 [Arabidopsis thaliana] gi|753...   326   3e-87
gb|AER38245.1| PME4 [Gossypium barbadense]                            323   4e-86
sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesteras...   317   2e-84
gb|AER38246.1| PME3 [Gossypium barbadense]                            314   2e-83

>ref|XP_002877272.1| pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323110|gb|EFH53531.1| pectinesterase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 527

 Score =  327 bits (839), Expect = 1e-87
 Identities = 162/281 (57%), Positives = 206/281 (73%), Gaps = 15/281 (5%)
 Frame = +1

Query: 1   LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
           LKVP   F  + K+ +D ++ A +IVSKF  K   SR+ NAI DCVDLLD  A+ELS  +
Sbjct: 40  LKVPPLEFAQAAKTVVDAIQKAVAIVSKFDKKVGKSRVSNAILDCVDLLDSAAEELSWII 99

Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
           SA +NPNG DNSTGD G DL+ W+SAAL NQ+TCLDGFEGTN  +KK++ G L +V + V
Sbjct: 100 SASQNPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSRVGTTV 159

Query: 361 ANVLGMVGQVPSNKNSPRD---------------FPAWMKPGDRRLLQAPTXXXXXXXXX 495
            N+L MV   PS K  P+                FP+W+KPGDR+LLQ            
Sbjct: 160 RNLLTMVHSPPS-KAKPKPIKAHTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVA 218

Query: 496 XMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATII 675
             DG+G+F+++ DA+LAAPDYST+RYVI+VKRGVY+ENV+IKKKKWN+M++GDG+DAT+I
Sbjct: 219 T-DGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYEENVEIKKKKWNIMIVGDGIDATVI 277

Query: 676 SGNRNFVDGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
           +GNR+F+DGWTTFRSATFAVS +GFI RDI+F+NTAGPEKH
Sbjct: 278 TGNRSFIDGWTTFRSATFAVSGRGFIGRDITFQNTAGPEKH 318


>ref|NP_189913.3| pectinesterase 32 [Arabidopsis thaliana]
           gi|75335617|sp|Q9LXK7.1|PME32_ARATH RecName:
           Full=Probable pectinesterase/pectinesterase inhibitor
           32; Includes: RecName: Full=Pectinesterase inhibitor 32;
           AltName: Full=Pectin methylesterase inhibitor 32;
           Includes: RecName: Full=Pectinesterase 32; Short=PE 32;
           AltName: Full=Pectin methylesterase 32; Short=AtPME32;
           Flags: Precursor gi|7649367|emb|CAB89048.1|
           pectinesterase-like protein [Arabidopsis thaliana]
           gi|17979141|gb|AAL49828.1| putative pectinesterase
           [Arabidopsis thaliana] gi|20465719|gb|AAM20328.1|
           putative pectinesterase [Arabidopsis thaliana]
           gi|332644260|gb|AEE77781.1| pectinesterase 32
           [Arabidopsis thaliana]
          Length = 527

 Score =  326 bits (836), Expect = 3e-87
 Identities = 163/281 (58%), Positives = 205/281 (72%), Gaps = 15/281 (5%)
 Frame = +1

Query: 1   LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
           L+VP   F  + K+ +D +  A +IVSKF  K   SR+ NAI DCVDLLD  A+ELS  +
Sbjct: 40  LRVPPLEFAEAAKTVVDAITKAVAIVSKFDKKAGKSRVSNAIVDCVDLLDSAAEELSWII 99

Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
           SA ++PNG DNSTGD G DL+ W+SAAL NQ+TCLDGFEGTN  +KK++ G L KV + V
Sbjct: 100 SASQSPNGKDNSTGDVGSDLRTWISAALSNQDTCLDGFEGTNGIIKKIVAGGLSKVGTTV 159

Query: 361 ANVLGMVGQVPSNKNSPRD---------------FPAWMKPGDRRLLQAPTXXXXXXXXX 495
            N+L MV   PS K  P+                FP+W+KPGDR+LLQ            
Sbjct: 160 RNLLTMVHSPPS-KPKPKPIKAQTMTKAHSGFSKFPSWVKPGDRKLLQTDNITVADAVVA 218

Query: 496 XMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATII 675
             DG+G+F+++ DA+LAAPDYST+RYVI+VKRGVY ENV+IKKKKWN+MM+GDG+DAT+I
Sbjct: 219 A-DGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVI 277

Query: 676 SGNRNFVDGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
           +GNR+F+DGWTTFRSATFAVS +GFIARDI+F+NTAGPEKH
Sbjct: 278 TGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKH 318


>gb|AER38245.1| PME4 [Gossypium barbadense]
          Length = 525

 Score =  323 bits (827), Expect = 4e-86
 Identities = 166/283 (58%), Positives = 206/283 (72%), Gaps = 17/283 (6%)
 Frame = +1

Query: 1   LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
           LKVP+  F+ S+K+TID ++ ATS+VS+F   F + RL NAI+DC+DLLD +ADELS T+
Sbjct: 36  LKVPATEFIGSLKTTIDAIRKATSVVSQFGGFFHDFRLSNAISDCLDLLDSSADELSWTM 95

Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
           SA +NPN  DNSTGD   DL+ WLSAA+ NQ+TC+DGFEGTNS VK V+ GSL ++TS V
Sbjct: 96  SASQNPNAKDNSTGDLSSDLRTWLSAAMVNQQTCIDGFEGTNSMVKTVVSGSLNQITSLV 155

Query: 361 ANVLGMVGQVPSNK-NSPRD----------------FPAWMKPGDRRLLQAPTXXXXXXX 489
            N+L MV   P++K N  R+                FP W K  DRRLLQ          
Sbjct: 156 RNLLIMVHPGPNSKSNGTRNGSQKGGGGGGHPGQSRFPVWFKREDRRLLQI--NGVTANV 213

Query: 490 XXXMDGSGSFSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDAT 669
               DGSG+F+ +MDA+  APD S  RYVIY+K+G+YKENV+IKKKKWNL+MIGDGMD T
Sbjct: 214 VVAADGSGNFTRIMDAVETAPDKSMNRYVIYIKKGLYKENVEIKKKKWNLVMIGDGMDVT 273

Query: 670 IISGNRNFVDGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
           +ISGNR+F+DGWTT RSATFAVS +GFIARDI+FENTAGP+KH
Sbjct: 274 VISGNRSFIDGWTTLRSATFAVSGRGFIARDITFENTAGPQKH 316


>sp|Q43062.1|PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B;
           Includes: RecName: Full=Pectinesterase inhibitor PPE8B;
           AltName: Full=Pectin methylesterase inhibitor PPE8B;
           Includes: RecName: Full=Pectinesterase PPE8B; Short=PE
           PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags:
           Precursor gi|1213629|emb|CAA65237.1| pectinesterase
           [Prunus persica]
          Length = 522

 Score =  317 bits (812), Expect = 2e-84
 Identities = 162/266 (60%), Positives = 198/266 (74%)
 Frame = +1

Query: 1   LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
           LKV +  F  S+K TID V+   SI+S+F N F + RL NAI+DC+DLLD++ADEL+ +L
Sbjct: 49  LKVSATEFAGSLKDTIDAVQQVASILSQFANAFGDFRLANAISDCLDLLDFSADELNWSL 108

Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
           SA +N  G +NSTG    DL+ WLSAAL NQ+TC +GFEGTNS V+ +I   L +VTS V
Sbjct: 109 SASQNQKGKNNSTGKLSSDLRTWLSAALVNQDTCSNGFEGTNSIVQGLISAGLGQVTSLV 168

Query: 361 ANVLGMVGQVPSNKNSPRDFPAWMKPGDRRLLQAPTXXXXXXXXXXMDGSGSFSSVMDAI 540
             +L  V    + +      P+W+K  DR+LLQA             DG+G+F++V DA+
Sbjct: 169 QELLTQVHPNSNQQGPNGQIPSWVKTKDRKLLQAD--GVSVDAIVAQDGTGNFTNVTDAV 226

Query: 541 LAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATIISGNRNFVDGWTTFRS 720
           LAAPDYS RRYVIY+KRG YKENV+IKKKKWNLMMIGDGMDATIISGNR+FVDGWTTFRS
Sbjct: 227 LAAPDYSMRRYVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRS 286

Query: 721 ATFAVSAKGFIARDISFENTAGPEKH 798
           ATFAVS +GFIARDI+FENTAGPEKH
Sbjct: 287 ATFAVSGRGFIARDITFENTAGPEKH 312


>gb|AER38246.1| PME3 [Gossypium barbadense]
          Length = 514

 Score =  314 bits (804), Expect = 2e-83
 Identities = 156/274 (56%), Positives = 205/274 (74%), Gaps = 8/274 (2%)
 Frame = +1

Query: 1   LKVPSATFLTSVKSTIDEVKLATSIVSKFVNKFVNSRLLNAINDCVDLLDYTADELSLTL 180
           + VP A F  S+++TID ++    IVS+F + F + RL NAI+DC+DLLD++AD+LS +L
Sbjct: 34  VNVPPAEFAGSLRTTIDAIRKVIPIVSQFGSFFGDFRLSNAISDCLDLLDFSADQLSWSL 93

Query: 181 SAIENPNGNDNSTGDRGVDLKAWLSAALGNQETCLDGFEGTNSFVKKVIGGSLQKVTSRV 360
           SA +NPNG  NSTGD   DL+ WLSAA+ NQETC++GFEGTN   K V+ G L +VTS V
Sbjct: 94  SASQNPNGKHNSTGDVASDLRTWLSAAMANQETCIEGFEGTNGIAKTVVAGGLNQVTSLV 153

Query: 361 ANVLGMVGQVPSNKNSPRD--------FPAWMKPGDRRLLQAPTXXXXXXXXXXMDGSGS 516
           +++L MV    S+  S  D        FP+W +  D++LLQA            +DG+G+
Sbjct: 154 SDLLTMVQPPGSDSRSNGDRKVAEKNRFPSWFEREDQKLLQA--NGVTADAVVALDGTGT 211

Query: 517 FSSVMDAILAAPDYSTRRYVIYVKRGVYKENVDIKKKKWNLMMIGDGMDATIISGNRNFV 696
           F+++MDA+ AAPDYS  R+VIY+K+G+YKENV+IKKKKWNLMM+GDG++ TIISGNR+FV
Sbjct: 212 FTNIMDAVAAAPDYSMNRHVIYIKKGLYKENVEIKKKKWNLMMVGDGINGTIISGNRSFV 271

Query: 697 DGWTTFRSATFAVSAKGFIARDISFENTAGPEKH 798
           DGWTTFRSATFAVS +GFIARDI+FENTAGP+KH
Sbjct: 272 DGWTTFRSATFAVSGRGFIARDITFENTAGPQKH 305


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