BLASTX nr result

ID: Coptis21_contig00036824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036824
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15591.3| unnamed protein product [Vitis vinifera]              201   8e-50
ref|XP_002278856.1| PREDICTED: ABC transporter G family member 1...   201   8e-50
gb|AFW56755.1| hypothetical protein ZEAMMB73_719044 [Zea mays]        180   1e-43
ref|XP_002318509.1| white-brown-complex ABC transporter family [...   179   2e-43
ref|XP_002445326.1| hypothetical protein SORBIDRAFT_07g009430 [S...   179   3e-43

>emb|CBI15591.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  201 bits (510), Expect = 8e-50
 Identities = 102/180 (56%), Positives = 121/180 (67%)
 Frame = +1

Query: 1   IHQPSFRIQMLLDRITILAR*KT*VVHVHFRLLNCDRCIYRLSILVDLNILYRGRLIYFG 180
           IHQPSFRIQMLLDRIT+LA                                 RGRLIY G
Sbjct: 250 IHQPSFRIQMLLDRITVLA---------------------------------RGRLIYTG 276

Query: 181 SPTALPAHLAGFGRPIPEGENSMEYLLDVIKEYDESTVGLDPLVLYQRDGLKPDVVASTP 360
            PT LP +L+ FGRP+P+GENS+EYLLDVIKEYDEST+G+DPLVLYQRDG+KPD VA TP
Sbjct: 277 RPTDLPTYLSAFGRPVPDGENSLEYLLDVIKEYDESTIGVDPLVLYQRDGIKPDQVARTP 336

Query: 361 VPKTPKTPRSYIKSNSSAKIIQLRSQAFSVRNQTPRRDSSQEYDDDEDFDNSLERRAQTP 540
           +PKTPKTP +  +   ++++  LRSQ FS  N TPR D+    DDD+DFDNSLER+  TP
Sbjct: 337 IPKTPKTPNTPYRKTPASQLFSLRSQPFSTGNSTPRLDAHYNDDDDDDFDNSLERKIATP 396


>ref|XP_002278856.1| PREDICTED: ABC transporter G family member 1-like [Vitis vinifera]
          Length = 801

 Score =  201 bits (510), Expect = 8e-50
 Identities = 102/180 (56%), Positives = 121/180 (67%)
 Frame = +1

Query: 1   IHQPSFRIQMLLDRITILAR*KT*VVHVHFRLLNCDRCIYRLSILVDLNILYRGRLIYFG 180
           IHQPSFRIQMLLDRIT+LA                                 RGRLIY G
Sbjct: 250 IHQPSFRIQMLLDRITVLA---------------------------------RGRLIYTG 276

Query: 181 SPTALPAHLAGFGRPIPEGENSMEYLLDVIKEYDESTVGLDPLVLYQRDGLKPDVVASTP 360
            PT LP +L+ FGRP+P+GENS+EYLLDVIKEYDEST+G+DPLVLYQRDG+KPD VA TP
Sbjct: 277 RPTDLPTYLSAFGRPVPDGENSLEYLLDVIKEYDESTIGVDPLVLYQRDGIKPDQVARTP 336

Query: 361 VPKTPKTPRSYIKSNSSAKIIQLRSQAFSVRNQTPRRDSSQEYDDDEDFDNSLERRAQTP 540
           +PKTPKTP +  +   ++++  LRSQ FS  N TPR D+    DDD+DFDNSLER+  TP
Sbjct: 337 IPKTPKTPNTPYRKTPASQLFSLRSQPFSTGNSTPRLDAHYNDDDDDDFDNSLERKIATP 396


>gb|AFW56755.1| hypothetical protein ZEAMMB73_719044 [Zea mays]
          Length = 892

 Score =  180 bits (457), Expect = 1e-43
 Identities = 101/186 (54%), Positives = 117/186 (62%), Gaps = 6/186 (3%)
 Frame = +1

Query: 1   IHQPSFRIQMLLDRITILAR*KT*VVHVHFRLLNCDRCIYRLSILVDLNILYRGRLIYFG 180
           IHQPSFRIQMLLDRI ILAR                                 GRLIY G
Sbjct: 348 IHQPSFRIQMLLDRIVILAR---------------------------------GRLIYLG 374

Query: 181 SPTALPAHLAGFGRPIPEGENSMEYLLDVIKEYDESTVGLDPLVLYQRDGLKPDVVASTP 360
           +P  LP HLAGFGRP+P+GENS+EYLLDVIKEYDEST+GL+PLV YQRDG KPD  A TP
Sbjct: 375 TPLTLPTHLAGFGRPVPDGENSIEYLLDVIKEYDESTLGLEPLVAYQRDGSKPDEAAKTP 434

Query: 361 VPKTPKTPRSYIKSNSSAKIIQLRSQAFSVRNQTPRRDSSQEY------DDDEDFDNSLE 522
           +PKTP+TP  Y KS    + IQL+S  FSV   TP  +    +      D+DE+FDNSLE
Sbjct: 435 IPKTPRTP--YQKS-VQFRQIQLKSNQFSVTTGTPHANPMSNFESYNIDDEDEEFDNSLE 491

Query: 523 RRAQTP 540
           R++ TP
Sbjct: 492 RKSHTP 497


>ref|XP_002318509.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222859182|gb|EEE96729.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 812

 Score =  179 bits (454), Expect = 2e-43
 Identities = 106/190 (55%), Positives = 122/190 (64%), Gaps = 10/190 (5%)
 Frame = +1

Query: 1   IHQPSFRIQMLLDRITILAR*KT*VVHVHFRLLNCDRCIYRLSILVDLNILYRGRLIYFG 180
           IHQPSFRIQMLLDRITILA                                 RGRLIY G
Sbjct: 250 IHQPSFRIQMLLDRITILA---------------------------------RGRLIYMG 276

Query: 181 SPTALPAHLAGFGRPIPEGENSMEYLLDVIKEYDESTVGLDPLVLYQRDGLKPDVVASTP 360
           SP ALP +L+ FGRP+P+GENS+EY LDVIKEYDESTVGLDPLV YQRDG+KPD  A TP
Sbjct: 277 SPVALPNYLSRFGRPLPDGENSIEYFLDVIKEYDESTVGLDPLVFYQRDGIKPDQAAQTP 336

Query: 361 VPKTPKTPRS----YIKSNSSAKIIQLRSQAFS-VRNQTPRRDSSQ----EYDDDEDFDN 513
           V KTP+T R+    Y+K+  S   I LRSQ FS   + T + DS Q    + DDDE+FDN
Sbjct: 337 VRKTPRTARTPRTPYMKTPLSKYAISLRSQGFSGTGDMTSQADSGQFDYYDEDDDEEFDN 396

Query: 514 SLERR-AQTP 540
           SLER+ A+TP
Sbjct: 397 SLERKPARTP 406


>ref|XP_002445326.1| hypothetical protein SORBIDRAFT_07g009430 [Sorghum bicolor]
           gi|241941676|gb|EES14821.1| hypothetical protein
           SORBIDRAFT_07g009430 [Sorghum bicolor]
          Length = 955

 Score =  179 bits (453), Expect = 3e-43
 Identities = 99/187 (52%), Positives = 118/187 (63%), Gaps = 7/187 (3%)
 Frame = +1

Query: 1   IHQPSFRIQMLLDRITILAR*KT*VVHVHFRLLNCDRCIYRLSILVDLNILYRGRLIYFG 180
           IHQPSFRIQMLLDRI ILAR                                 GRLIY G
Sbjct: 409 IHQPSFRIQMLLDRIVILAR---------------------------------GRLIYLG 435

Query: 181 SPTALPAHLAGFGRPIPEGENSMEYLLDVIKEYDESTVGLDPLVLYQRDGLKPDVVASTP 360
           SP  LPAHLAGFGRP+P+GENS+EYLLDVIKEYDEST+GLDPLV YQRDG KPD  A TP
Sbjct: 436 SPITLPAHLAGFGRPVPDGENSIEYLLDVIKEYDESTLGLDPLVAYQRDGSKPDEAAKTP 495

Query: 361 VPKTPKTPRSYIKSNSSAKIIQLRSQAFSVRNQTPRRDSS----QEY---DDDEDFDNSL 519
           +PKTP+TP    + +   + +QL+S  FS    TP   ++    + Y   D++E+FDNSL
Sbjct: 496 IPKTPRTPH---QKSVQFRQMQLKSNQFSAATGTPHATNTFSNFESYNIDDEEEEFDNSL 552

Query: 520 ERRAQTP 540
           ER++ TP
Sbjct: 553 ERKSHTP 559


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