BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036795
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   105   5e-21
emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]   105   5e-21
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...   102   2e-20
emb|CBI40731.3| unnamed protein product [Vitis vinifera]               84   9e-15
gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]              82   4e-14

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/128 (44%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
 Frame = -2

Query: 415  RGRSEDVTMKTD-SVPVVILDTSSVDKRLFERPTSEDSAKHDKWCEKDGCVFRPVFCPFC 239
            RG  E + + T  S+PVV+ D+SSV++RL  + T   + +H  WCE+DGCVF  ++CPFC
Sbjct: 1082 RGSLESLAVNTSTSIPVVVSDSSSVNQRLCNK-TLGGAQEHGVWCEEDGCVFNTIYCPFC 1140

Query: 238  TASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEAFKDKATV-PGGNSDLG-QAVG 65
            +  +  LG+++MA +A N+ LLNKIL YFD +EIK+ EA  DK    P  + D       
Sbjct: 1141 STPNNCLGVQIMATNASNVDLLNKILFYFDRLEIKNPEASTDKGIKNPESSEDKDLSPPS 1200

Query: 64   GSNLNQVS 41
            GSN ++VS
Sbjct: 1201 GSNSDEVS 1208


>emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
          Length = 1261

 Score =  105 bits (261), Expect = 5e-21
 Identities = 57/128 (44%), Positives = 82/128 (64%), Gaps = 3/128 (2%)
 Frame = -2

Query: 415  RGRSEDVTMKTD-SVPVVILDTSSVDKRLFERPTSEDSAKHDKWCEKDGCVFRPVFCPFC 239
            RG  E + + T  S+PVV+ D+SSV++RL  + T   + +H  WCE+DGCVF  ++CPFC
Sbjct: 1044 RGSLESLAVNTTTSIPVVVSDSSSVNQRLCNK-TLGGAQEHGVWCEEDGCVFNTIYCPFC 1102

Query: 238  TASDRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEAFKDKATV-PGGNSDLG-QAVG 65
            +  +  LG+++MA +A N+ LLNKIL YFD +EIK+ EA  DK    P  + D       
Sbjct: 1103 STPNNCLGVQIMATNASNVELLNKILFYFDRLEIKNPEASTDKGIKNPESSEDKDLSPPS 1162

Query: 64   GSNLNQVS 41
            GSN ++VS
Sbjct: 1163 GSNSDEVS 1170


>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
            communis] gi|223551394|gb|EEF52880.1| brca1 interacting
            protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/102 (50%), Positives = 74/102 (72%)
 Frame = -2

Query: 409  RSEDVTMKTDSVPVVILDTSSVDKRLFERPTSEDSAKHDKWCEKDGCVFRPVFCPFCTAS 230
            R E  +  T SVPV++ D +SVD+RL+   T +D+     WCE+DGCVF  ++CPFC++S
Sbjct: 1109 RFEYCSNNTKSVPVLMADIASVDQRLYNI-TLKDNPGRGVWCEEDGCVFNSIYCPFCSSS 1167

Query: 229  DRFLGLRVMAADAPNMHLLNKILLYFDHVEIKSLEAFKDKAT 104
            +  LG+++MA DA N+ LLNKIL YFD +EI++LEA  D+A+
Sbjct: 1168 N-CLGVQIMATDASNVQLLNKILFYFDGLEIQNLEASTDRAS 1208


>emb|CBI40731.3| unnamed protein product [Vitis vinifera]
          Length = 1218

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/90 (44%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
 Frame = -2

Query: 415  RGRSEDVTMKTD-SVPVVILDTSSVDKRLFERPTSEDSAKHDKWCEKDGCVFRPVFCPFC 239
            RG  E + + T  S+PVV+ D+SSV++RL  + T   + +H  WCE+DGCVF  ++CPFC
Sbjct: 1045 RGSLESLAVNTSTSIPVVVSDSSSVNQRLCNK-TLGGAQEHGVWCEEDGCVFNTIYCPFC 1103

Query: 238  TASDRFLGLRVMAADAPNMHLLNKILLYFD 149
            +  +  LG+++MA +A N+ LLNK+ L  D
Sbjct: 1104 STPNNCLGVQIMATNASNVDLLNKVWLSCD 1133


>gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
          Length = 1119

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/89 (42%), Positives = 59/89 (66%)
 Frame = -2

Query: 379  SVPVVILDTSSVDKRLFERPTSEDSAKHDKWCEKDGCVFRPVFCPFCTASDRFLGLRVMA 200
            SV V++ D S V++RL     SE S     WC++DGCVF+ +FCPFC+  +  LG++VMA
Sbjct: 977  SVSVIMTDCSLVNQRLCTN--SESSNGQGIWCQQDGCVFKTIFCPFCSVPNTCLGMQVMA 1034

Query: 199  ADAPNMHLLNKILLYFDHVEIKSLEAFKD 113
             D+ N+  ++KIL + DH+E+ +  A K+
Sbjct: 1035 TDSSNVQFMSKILFFADHLEVTNDAASKE 1063