BLASTX nr result

ID: Coptis21_contig00036794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036794
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632840.1| PREDICTED: putative disease resistance prote...    59   3e-07
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    55   5e-06

>ref|XP_003632840.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 903

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +3

Query: 3   QLVTKTDCYAMEIDGKE-----ISDSKVRHLSLLPDTKHPFLDVEKFSVYNAPSLRTLIR 167
           Q +T+ +C+ +E+D ++     +S  K+RH++L+     P       S YN  +L TL+ 
Sbjct: 483 QFLTQNECFIVEVDNQQMESIDLSFKKIRHITLVVRESTPNF----VSTYNMKNLHTLLA 538

Query: 168 RLYTPVSLA-----LVDRLTRLRALDLSGNDLTE-LPGEVKNLLHLRFLD 299
           +     S+      L+  LT LRALDLS N L E LP EV  L+HLRFL+
Sbjct: 539 KEAFKSSVLVALPNLLRHLTCLRALDLSSNQLIEELPKEVGKLIHLRFLN 588


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 19/118 (16%)
 Frame = +3

Query: 3   QLVTKTDCYAMEIDGKEISD-----SKVRHLSLLPDTK--HPFLDVEKFSVYNAPSLRTL 161
           Q +TK +C  +++D + IS      ++ RHL+L+   +  HP       SVYN  +LRTL
Sbjct: 510 QFLTKNECLIIDVDERHISGLDMLHTRTRHLTLIGPMEYFHP-------SVYNFRNLRTL 562

Query: 162 I----RRLYTPVSLA--------LVDRLTRLRALDLSGNDLTELPGEVKNLLHLRFLD 299
           +      L  P  L         L + LT LR LDLS   +T LP E+  LLHLR+L+
Sbjct: 563 LVLQKEMLTVPGDLFRIRSIPGDLFNCLTSLRGLDLSHTLITRLPSEIGKLLHLRWLN 620


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