BLASTX nr result

ID: Coptis21_contig00036790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036790
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264667.2| PREDICTED: uncharacterized protein LOC100240...    60   1e-07
ref|XP_002264203.2| PREDICTED: disease resistance protein At4g27...    57   1e-06
ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27...    56   3e-06

>ref|XP_002264667.2| PREDICTED: uncharacterized protein LOC100240893 [Vitis vinifera]
          Length = 1970

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/77 (40%), Positives = 46/77 (59%)
 Frame = +1

Query: 28  SVDKAFSNLEELRLAGLSKFEAICDEEVPLQFLKKLRVLNVGFCGNVITLLPCDLTVRLQ 207
           S   +F NLEEL+L GL K + I   ++ L+F  KLR+L V  C  ++ L+P  L    Q
Sbjct: 711 SYQVSFPNLEELKLVGLPKLKMIWHHQLSLEFFCKLRILRVHNCPRLVNLVPSHLIQSFQ 770

Query: 208 NLEKITVIWCPYLENLF 258
           NL+++ V  C  LE++F
Sbjct: 771 NLKELNVYDCKALESVF 787


>ref|XP_002264203.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1545

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/76 (38%), Positives = 47/76 (61%)
 Frame = +1

Query: 31   VDKAFSNLEELRLAGLSKFEAICDEEVPLQFLKKLRVLNVGFCGNVITLLPCDLTVRLQN 210
            ++ +F NLEEL+L  L K + I   ++ L+F  KLR+L+V  C  ++ L+P  L    QN
Sbjct: 915  LEVSFPNLEELKLVDLPKLKMIWHHQLSLEFFCKLRILSVHNCPCLVNLVPSHLIQSFQN 974

Query: 211  LEKITVIWCPYLENLF 258
            L+++ V  C  LE++F
Sbjct: 975  LKEVNVYNCEALESVF 990


>ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1144

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/82 (35%), Positives = 44/82 (53%)
 Frame = +1

Query: 19   TSGSVDKAFSNLEELRLAGLSKFEAICDEEVPLQFLKKLRVLNVGFCGNVITLLPCDLTV 198
            T G    AF N+E + L  L   + +    +P+   +KLRVL V  CG + TL P DL  
Sbjct: 807  TQGVHPVAFPNIETIHLTHLCGMKVLSSGTLPMGSFRKLRVLTVEQCGGLSTLFPADLLQ 866

Query: 199  RLQNLEKITVIWCPYLENLFGV 264
             LQNLE + +  C  ++++F +
Sbjct: 867  LLQNLEIVQITCCQEMQDVFQI 888


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