BLASTX nr result

ID: Coptis21_contig00036784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036784
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]   181   4e-44
dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana...   181   4e-44
emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]       180   1e-43
gb|ABW97708.1| serine palmitoyltransferase long chain base subun...   180   1e-43
ref|NP_197756.1| serine palmitoyltransferase [Arabidopsis thalia...   179   3e-43

>dbj|BAG68298.1| serine palmitoyltransferase [Nicotiana benthamiana]
          Length = 489

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = -1

Query: 307 ILSAIKVILGEDGSSRGAQKLTRIRENSNFFRSELQKIGFKVLGDNDSPVIPIMIYNPGK 128
           I+SAIKVILGEDGSSRGAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP K
Sbjct: 351 IISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK 410

Query: 127 IPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTRED 2
           IPAFSRECL+QNVAVVIVGFPAT L LARARICISA+H+RED
Sbjct: 411 IPAFSRECLKQNVAVVIVGFPATPLLLARARICISAAHSRED 452


>dbj|BAE96963.1| serine palmitpoyltransferase subunit2 [Nicotiana tabacum]
           gi|159506876|gb|ABW97709.1| serine palmitoyltransferase
           long chain base subunit [Nicotiana benthamiana]
          Length = 489

 Score =  181 bits (460), Expect = 4e-44
 Identities = 90/102 (88%), Positives = 98/102 (96%)
 Frame = -1

Query: 307 ILSAIKVILGEDGSSRGAQKLTRIRENSNFFRSELQKIGFKVLGDNDSPVIPIMIYNPGK 128
           I+SAIKVILGEDGSSRGAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIM+YNP K
Sbjct: 351 IISAIKVILGEDGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAK 410

Query: 127 IPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTRED 2
           IPAFSRECL+QNVAVVIVGFPAT L LARARICISA+H+RED
Sbjct: 411 IPAFSRECLKQNVAVVIVGFPATPLLLARARICISAAHSRED 452


>emb|CAB44316.1| serine palmitoyltransferase [Solanum tuberosum]
          Length = 489

 Score =  180 bits (456), Expect = 1e-43
 Identities = 89/102 (87%), Positives = 99/102 (97%)
 Frame = -1

Query: 307 ILSAIKVILGEDGSSRGAQKLTRIRENSNFFRSELQKIGFKVLGDNDSPVIPIMIYNPGK 128
           I+SAIKVILGEDG+SRGAQKL RIRENSNFFRSELQK+GF+VLGDNDSPV+PIMIYNPGK
Sbjct: 351 IISAIKVILGEDGTSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMIYNPGK 410

Query: 127 IPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTRED 2
           IPAFSRECL+++VAVVIVGFPAT L LARARICISA+H+RED
Sbjct: 411 IPAFSRECLKRSVAVVIVGFPATPLLLARARICISAAHSRED 452


>gb|ABW97708.1| serine palmitoyltransferase long chain base subunit [Brassica rapa
           subsp. chinensis]
          Length = 489

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/102 (86%), Positives = 98/102 (96%)
 Frame = -1

Query: 307 ILSAIKVILGEDGSSRGAQKLTRIRENSNFFRSELQKIGFKVLGDNDSPVIPIMIYNPGK 128
           I+SAIKVILGEDGS+RGAQKL RIRENSNFFR+ELQK+GF+VLGDNDSPV+PIM+YNP K
Sbjct: 351 IISAIKVILGEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAK 410

Query: 127 IPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTRED 2
           IPAFSRECLR+NVAVV+VGFPAT L LARARICISASH+RED
Sbjct: 411 IPAFSRECLRENVAVVVVGFPATPLLLARARICISASHSRED 452


>ref|NP_197756.1| serine palmitoyltransferase [Arabidopsis thaliana]
           gi|79328575|ref|NP_001031932.1| serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|75180412|sp|Q9LSZ9.1|LCB2A_ARATH RecName: Full=Long
           chain base biosynthesis protein 2a; Short=AtLCB2a;
           AltName: Full=Long chain base biosynthesis protein 2;
           Short=AtLCB2 gi|8809693|dbj|BAA97234.1| serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|15292791|gb|AAK92764.1| putative serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|22136834|gb|AAM91761.1| putative serine
           palmitoyltransferase [Arabidopsis thaliana]
           gi|332005813|gb|AED93196.1| serine palmitoyltransferase
           [Arabidopsis thaliana] gi|332005814|gb|AED93197.1|
           serine palmitoyltransferase [Arabidopsis thaliana]
          Length = 489

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/102 (86%), Positives = 97/102 (95%)
 Frame = -1

Query: 307 ILSAIKVILGEDGSSRGAQKLTRIRENSNFFRSELQKIGFKVLGDNDSPVIPIMIYNPGK 128
           I+SAIKVILGEDGS+RGAQKL RIRENSNFFR+ELQK+GF+VLGDNDSPV+PIM+YNP K
Sbjct: 351 IISAIKVILGEDGSNRGAQKLARIRENSNFFRAELQKMGFEVLGDNDSPVMPIMLYNPAK 410

Query: 127 IPAFSRECLRQNVAVVIVGFPATVLPLARARICISASHTRED 2
           IPAFSRECLRQ VAVV+VGFPAT L LARARICISASH+RED
Sbjct: 411 IPAFSRECLRQKVAVVVVGFPATPLLLARARICISASHSRED 452


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