BLASTX nr result

ID: Coptis21_contig00036772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036772
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   267   6e-70
ref|XP_002300273.1| predicted protein [Populus trichocarpa] gi|2...   262   2e-68
emb|CBI22452.3| unnamed protein product [Vitis vinifera]              257   8e-67
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   257   8e-67
ref|XP_002466818.1| hypothetical protein SORBIDRAFT_01g014630 [S...   251   4e-65

>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  267 bits (683), Expect = 6e-70
 Identities = 128/155 (82%), Positives = 143/155 (92%)
 Frame = +3

Query: 3   MPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPNFIASSLDEAYLDISEVCKAR 182
           MPGFIARKLCPELIFVP DFKKYT+ S+LTRKVF +YDPNFIA SLDEAYLDI+EVC+ R
Sbjct: 151 MPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFGRYDPNFIAGSLDEAYLDITEVCRER 210

Query: 183 GVSSEEVASELRAGVYQETGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNNRMAVMTFV 362
            V SEE+A ELRAGVY+ETGLTCSAGVAPNR++AKVCSDINKPNG +VLPN+RMAVMTFV
Sbjct: 211 NVKSEEIAQELRAGVYEETGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVMTFV 270

Query: 363 SSLPIRKIGGIGKVTEHILRDVLGISTCEEILRKS 467
           SSLPIRKIGGIGKVTEHIL+ V GI+TCE++L KS
Sbjct: 271 SSLPIRKIGGIGKVTEHILKGVFGINTCEQMLEKS 305


>ref|XP_002300273.1| predicted protein [Populus trichocarpa] gi|222847531|gb|EEE85078.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  262 bits (670), Expect = 2e-68
 Identities = 127/154 (82%), Positives = 141/154 (91%)
 Frame = +3

Query: 3   MPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPNFIASSLDEAYLDISEVCKAR 182
           MPGFIARKLCPELIFVP DFKKYTH SELTRKVF+KYDPNF+A+SLDEA+LDI+EVCK R
Sbjct: 126 MPGFIARKLCPELIFVPTDFKKYTHYSELTRKVFEKYDPNFMAASLDEAHLDITEVCKER 185

Query: 183 GVSSEEVASELRAGVYQETGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNNRMAVMTFV 362
           G+S  E+A ELR  V +ETGLTCSAGVAPNR++AKVCSDINKPNG FVL N+RMAVMTF+
Sbjct: 186 GMSCGEIAEELRKCVNEETGLTCSAGVAPNRLLAKVCSDINKPNGQFVLTNDRMAVMTFI 245

Query: 363 SSLPIRKIGGIGKVTEHILRDVLGISTCEEILRK 464
           SSLPIRKIGGIGKVTEHILRD  GISTCEE+L+K
Sbjct: 246 SSLPIRKIGGIGKVTEHILRDAFGISTCEEMLQK 279


>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  257 bits (656), Expect = 8e-67
 Identities = 123/154 (79%), Positives = 140/154 (90%)
 Frame = +3

Query: 3   MPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPNFIASSLDEAYLDISEVCKAR 182
           MPGFIARKLCPELIFVP DFKKYT+ S+LTRKVFQKYDPNF+A+SLDEAYLDI+EVC  R
Sbjct: 156 MPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVCNER 215

Query: 183 GVSSEEVASELRAGVYQETGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNNRMAVMTFV 362
            ++S E+A ELR  V++ TGLTCSAGVAPNR++AKVCSDINKPNG FVLP+NRMAVMTF+
Sbjct: 216 DLTSGEIAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRMAVMTFI 275

Query: 363 SSLPIRKIGGIGKVTEHILRDVLGISTCEEILRK 464
           SSLPIRKIGGIGKVTEHIL  V GI+TCEE+L+K
Sbjct: 276 SSLPIRKIGGIGKVTEHILSGVFGINTCEEMLQK 309


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  257 bits (656), Expect = 8e-67
 Identities = 123/154 (79%), Positives = 140/154 (90%)
 Frame = +3

Query: 3   MPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPNFIASSLDEAYLDISEVCKAR 182
           MPGFIARKLCPELIFVP DFKKYT+ S+LTRKVFQKYDPNF+A+SLDEAYLDI+EVC  R
Sbjct: 156 MPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVCNER 215

Query: 183 GVSSEEVASELRAGVYQETGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNNRMAVMTFV 362
            ++S E+A ELR  V++ TGLTCSAGVAPNR++AKVCSDINKPNG FVLP+NRMAVMTF+
Sbjct: 216 DLTSGEIAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRMAVMTFI 275

Query: 363 SSLPIRKIGGIGKVTEHILRDVLGISTCEEILRK 464
           SSLPIRKIGGIGKVTEHIL  V GI+TCEE+L+K
Sbjct: 276 SSLPIRKIGGIGKVTEHILSGVFGINTCEEMLQK 309


>ref|XP_002466818.1| hypothetical protein SORBIDRAFT_01g014630 [Sorghum bicolor]
           gi|241920672|gb|EER93816.1| hypothetical protein
           SORBIDRAFT_01g014630 [Sorghum bicolor]
          Length = 668

 Score =  251 bits (641), Expect = 4e-65
 Identities = 119/155 (76%), Positives = 141/155 (90%)
 Frame = +3

Query: 3   MPGFIARKLCPELIFVPPDFKKYTHCSELTRKVFQKYDPNFIASSLDEAYLDISEVCKAR 182
           MPGFI  KLCP L+FV P+F++YTH SELTRKVFQ+YDPNFIA+SLDEAYL+I+ VC  R
Sbjct: 155 MPGFIGCKLCPGLVFVRPNFERYTHYSELTRKVFQRYDPNFIATSLDEAYLNITNVCIER 214

Query: 183 GVSSEEVASELRAGVYQETGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNNRMAVMTFV 362
           G++ EEVA+ELR+ +YQETGLTCSAGVAPNRMIAKVCSDINKPNG F+LPN+R AV+TFV
Sbjct: 215 GITGEEVATELRSAIYQETGLTCSAGVAPNRMIAKVCSDINKPNGQFILPNDREAVLTFV 274

Query: 363 SSLPIRKIGGIGKVTEHILRDVLGISTCEEILRKS 467
           S+LPIRKIGGIGKVTE +LR VLGISTC+E+L+K+
Sbjct: 275 STLPIRKIGGIGKVTEQMLRQVLGISTCQEMLQKA 309


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