BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036767
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    88   6e-16
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    82   3e-14
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    80   2e-13
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...    79   3e-13
gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japo...    79   5e-13

>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/106 (43%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   TRKKLRKWNHEVFGNVPLNIKKVRQALE--QAMVEDMLVAENYNKVTSLKTELLAWLEKE 176
           +++KL+KWN EVFGN+     K+ Q ++  Q  +E     +  NK   L  E    LE+E
Sbjct: 246 SKEKLKKWNKEVFGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFEVVLEQE 305

Query: 177 ESCWKQKAGFNWVAEGGRNTRFFHLSTVYRRRKNIIEKLRKDEGGW 314
           E  W QK+   W+A G RNT++FH ST+ RRR+N IE L+ DEG W
Sbjct: 306 EIVWFQKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKW 351


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
 Frame = +3

Query: 6    RKKLRKWNHEVFGNVPLNIKKVRQALEQAMVEDMLVAENYNKVTSLKTELL----AWLEK 173
            + KL+KWN EVFG+V  N +K     E  +V+++L     + + S + EL+      LE+
Sbjct: 691  KSKLKKWNREVFGDV--NRRKESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQ 748

Query: 174  EESCWKQKAGFNWVAEGGRNTRFFHLSTVYRRRKNIIEKLRKDEGGW 314
            EE  W QK+   WV  G RNT++FH  TV RRR+N IE L+ D+G W
Sbjct: 749  EEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEMLKADDGSW 795


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 7/110 (6%)
 Frame = +3

Query: 6   RKKLRKWNHEVFGNVPL-------NIKKVRQALEQAMVEDMLVAENYNKVTSLKTELLAW 164
           ++KLRKWN EVFG++ +       +IK+V+  L   + +D+L  E       L  E+   
Sbjct: 137 QRKLRKWNREVFGDIHVRKEKLVADIKEVQDLLGVVLSDDLLAKEEV-----LLKEMDLV 191

Query: 165 LEKEESCWKQKAGFNWVAEGGRNTRFFHLSTVYRRRKNIIEKLRKDEGGW 314
           LE+EE+ W QK+   ++  G RNT FFH ST+ RRR+N IE L+ D+  W
Sbjct: 192 LEQEETLWFQKSREKYIELGDRNTTFFHTSTIIRRRRNRIESLKGDDDRW 241


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/102 (38%), Positives = 62/102 (60%)
 Frame = +3

Query: 3   TRKKLRKWNHEVFGNVPLNIKKVRQALEQAMVEDMLVAENYNKVTSLKTELLAWLEKEES 182
           T + L++W+ +  GN+  +I++ R+ LE+  +     +E    V  LK  L   L +EE 
Sbjct: 529 TMENLKRWSRDKIGNIKKSIERCRRELEEMRMRGREDSEP--DVHRLKIFLQELLHREEI 586

Query: 183 CWKQKAGFNWVAEGGRNTRFFHLSTVYRRRKNIIEKLRKDEG 308
            WKQ++   W+ EG RNTR+FHL   +R RKN+I+KLR+ +G
Sbjct: 587 WWKQRSRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDG 628


>gb|EEE59920.1| hypothetical protein OsJ_12548 [Oryza sativa Japonica Group]
          Length = 1076

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/102 (39%), Positives = 63/102 (61%)
 Frame = +3

Query: 3   TRKKLRKWNHEVFGNVPLNIKKVRQALEQAMVEDMLVAENYNKVTSLKTELLAWLEKEES 182
           T  KL  W+ +  GNV   IK +R+ L +  + ++ + +  N+V S+K EL   L +EE 
Sbjct: 43  TMTKLVSWSKDKIGNVRKKIKDLREKLGE--LRNIGLLDTDNEVHSVKKELEEMLHREEI 100

Query: 183 CWKQKAGFNWVAEGGRNTRFFHLSTVYRRRKNIIEKLRKDEG 308
            WKQ++   W+ EG  NTR+FHL   +R +KN I+KL+K++G
Sbjct: 101 WWKQRSRITWLKEGDLNTRYFHLKASWRAKKNKIKKLKKNDG 142