BLASTX nr result

ID: Coptis21_contig00036765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036765
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicot...    57   2e-06
gb|AGC54441.1| 26S proteasome ATPase regulatory subunit 6 [Capsi...    57   2e-06
gb|AAF27916.1|AF220199_1 26S proteasome regulatory subunit 8 [Pi...    57   2e-06
gb|AAC32150.1| TAT-binding protein homolog [Picea mariana]             57   2e-06
dbj|BAA87070.2| TAT-binding protein homolog [Matricaria chamomilla]    57   2e-06

>gb|AGC54442.1| 26S proteasome ATPase regulatory subunit 6 [Nicotiana tabacum]
          Length = 417

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TQEDFEMAVAKVMKKETEKNMSQRKLWK 85
           TQEDFEMAVAKVMKKETEKNMS RKLWK
Sbjct: 390 TQEDFEMAVAKVMKKETEKNMSLRKLWK 417


>gb|AGC54441.1| 26S proteasome ATPase regulatory subunit 6 [Capsicum annuum]
          Length = 417

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TQEDFEMAVAKVMKKETEKNMSQRKLWK 85
           TQEDFEMAVAKVMKKETEKNMS RKLWK
Sbjct: 390 TQEDFEMAVAKVMKKETEKNMSLRKLWK 417


>gb|AAF27916.1|AF220199_1 26S proteasome regulatory subunit 8 [Pinus taeda]
          Length = 433

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TQEDFEMAVAKVMKKETEKNMSQRKLWK 85
           TQEDFEMAVAKVMKKETEKNMS RKLWK
Sbjct: 406 TQEDFEMAVAKVMKKETEKNMSLRKLWK 433


>gb|AAC32150.1| TAT-binding protein homolog [Picea mariana]
          Length = 175

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TQEDFEMAVAKVMKKETEKNMSQRKLWK 85
           TQEDFEMAVAKVMKKETEKNMS RKLWK
Sbjct: 148 TQEDFEMAVAKVMKKETEKNMSLRKLWK 175


>dbj|BAA87070.2| TAT-binding protein homolog [Matricaria chamomilla]
          Length = 414

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   TQEDFEMAVAKVMKKETEKNMSQRKLWK 85
           TQEDFEMAVAKVMKKETEKNMS RKLWK
Sbjct: 387 TQEDFEMAVAKVMKKETEKNMSLRKLWK 414


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