BLASTX nr result

ID: Coptis21_contig00036762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036762
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15487.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_002279634.2| PREDICTED: probable receptor-like protein ki...    60   2e-07
emb|CBI26984.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002321486.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>emb|CBI15487.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 28/47 (59%), Positives = 36/47 (76%)
 Frame = +3

Query: 36  YTKILRNGFVLKWTFNDCTECRQSGGRCGILNEEFVCFCNDRTHSKS 176
           +T+ILR GFVL WT N+C+ C +SGGRCG  N EF+CFC DR H ++
Sbjct: 518 FTEILREGFVLSWTANNCSSCERSGGRCGFENNEFICFCQDRPHLRT 564


>ref|XP_002279634.2| PREDICTED: probable receptor-like protein kinase At1g67000-like
           [Vitis vinifera]
          Length = 459

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
 Frame = +3

Query: 42  KILRNGFVLKWTFNDCTECRQSGGRCG--ILNEEFVCFCNDRTHSK 173
           +++R GF+LKW  +DC++C +SGG+CG  I +  F CFC DR H+K
Sbjct: 37  ELVRRGFMLKWRASDCSKCEESGGKCGFNITDYHFKCFCRDRAHAK 82


>emb|CBI26984.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/46 (50%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
 Frame = +3

Query: 42  KILRNGFVLKWTFNDCTECRQSGGRCG--ILNEEFVCFCNDRTHSK 173
           +++R GF+LKW  +DC++C +SGG+CG  I +  F CFC DR H+K
Sbjct: 199 ELVRRGFMLKWRASDCSKCEESGGKCGFNITDYHFKCFCRDRAHAK 244


>ref|XP_002321488.1| predicted protein [Populus trichocarpa] gi|222868484|gb|EEF05615.1|
           predicted protein [Populus trichocarpa]
          Length = 198

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +3

Query: 57  GFVLKWTFNDCTECRQSGGRCGILNEEFVCFCNDRTHSKS 176
           GF++ WT  +C+ C +SGGRCG  N EF+CFC DR   KS
Sbjct: 146 GFLMNWTARNCSTCERSGGRCGFENNEFICFCRDRPRLKS 185


>ref|XP_002321486.1| predicted protein [Populus trichocarpa] gi|222868482|gb|EEF05613.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 21/35 (60%), Positives = 27/35 (77%)
 Frame = +3

Query: 57  GFVLKWTFNDCTECRQSGGRCGILNEEFVCFCNDR 161
           GF++ WT +DC+ C +SGGRCG  N EF+CFC DR
Sbjct: 2   GFLMNWTAHDCSTCERSGGRCGFENNEFICFCRDR 36


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