BLASTX nr result
ID: Coptis21_contig00036742
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00036742 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24922.3| unnamed protein product [Vitis vinifera] 315 4e-84 ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v... 315 4e-84 ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2... 311 3e-83 ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom... 305 4e-81 ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis... 305 4e-81 >emb|CBI24922.3| unnamed protein product [Vitis vinifera] Length = 1452 Score = 315 bits (806), Expect = 4e-84 Identities = 149/182 (81%), Positives = 165/182 (90%) Frame = +2 Query: 2 GSTRGWSVKYYKGLGTSTNVEGQEYFHDLDRHKKDFVWGDEEDGDAIEMAFSKKKIEARK 181 G+ GWS+KYYKGLGTST+ EG+EYF DL +HKKDF+W DE+DGDAIE+AFSKKKIE RK Sbjct: 598 GNASGWSIKYYKGLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELAFSKKKIEERK 657 Query: 182 NWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIADLQRSIPSMVDGLKPGQRKILFCSF 361 NWLRQF+PGTYLD KEKLIKY DFVNKELILFS+ADLQRSIPSMVDGLKPGQRKILFCSF Sbjct: 658 NWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 717 Query: 362 KRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTIIGLAQNFVGSNNINLFNPEGQFGSRI 541 KRN + KI+QFSGYVSEHSAYHHGEQSLASTIIG+AQ+FVGSNNINL P GQFG+R Sbjct: 718 KRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRH 777 Query: 542 KG 547 +G Sbjct: 778 QG 779 >ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera] Length = 1489 Score = 315 bits (806), Expect = 4e-84 Identities = 149/182 (81%), Positives = 165/182 (90%) Frame = +2 Query: 2 GSTRGWSVKYYKGLGTSTNVEGQEYFHDLDRHKKDFVWGDEEDGDAIEMAFSKKKIEARK 181 G+ GWS+KYYKGLGTST+ EG+EYF DL +HKKDF+W DE+DGDAIE+AFSKKKIE RK Sbjct: 598 GNASGWSIKYYKGLGTSTSKEGKEYFKDLGKHKKDFMWVDEKDGDAIELAFSKKKIEERK 657 Query: 182 NWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIADLQRSIPSMVDGLKPGQRKILFCSF 361 NWLRQF+PGTYLD KEKLIKY DFVNKELILFS+ADLQRSIPSMVDGLKPGQRKILFCSF Sbjct: 658 NWLRQFQPGTYLDQKEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 717 Query: 362 KRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTIIGLAQNFVGSNNINLFNPEGQFGSRI 541 KRN + KI+QFSGYVSEHSAYHHGEQSLASTIIG+AQ+FVGSNNINL P GQFG+R Sbjct: 718 KRNFIKEAKIAQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRH 777 Query: 542 KG 547 +G Sbjct: 778 QG 779 >ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1| predicted protein [Populus trichocarpa] Length = 1468 Score = 311 bits (798), Expect = 3e-83 Identities = 147/182 (80%), Positives = 163/182 (89%) Frame = +2 Query: 2 GSTRGWSVKYYKGLGTSTNVEGQEYFHDLDRHKKDFVWGDEEDGDAIEMAFSKKKIEARK 181 G+ GWS+KYYKGLGTST+ EG+ YF LD+HKKDF+W DE+DGDAIE+AFSKKKIEARK Sbjct: 595 GNASGWSIKYYKGLGTSTSKEGKAYFQSLDKHKKDFIWMDEQDGDAIELAFSKKKIEARK 654 Query: 182 NWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIADLQRSIPSMVDGLKPGQRKILFCSF 361 NWLRQ+EPGT+LD +KLIKY DF+NKELILFS+ADLQRSIPSMVDGLKPGQRKILFCSF Sbjct: 655 NWLRQYEPGTHLDQNQKLIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 714 Query: 362 KRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTIIGLAQNFVGSNNINLFNPEGQFGSRI 541 KRN V KISQFSGYVSEHSAYHHGEQSLASTIIG+AQ+FVGSNNINL P GQFG+R Sbjct: 715 KRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRS 774 Query: 542 KG 547 G Sbjct: 775 VG 776 >ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis sativus] Length = 1460 Score = 305 bits (780), Expect = 4e-81 Identities = 144/182 (79%), Positives = 160/182 (87%) Frame = +2 Query: 2 GSTRGWSVKYYKGLGTSTNVEGQEYFHDLDRHKKDFVWGDEEDGDAIEMAFSKKKIEARK 181 G+ GWS+KYYKGLGTST+ EG+EYF L +HKKDF+W D+ DG+AIE+AFSKKKIE RK Sbjct: 562 GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 621 Query: 182 NWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIADLQRSIPSMVDGLKPGQRKILFCSF 361 NWLRQFEPGT+LD KLIKY DFVNKELILFS+ADLQRSIPSMVDGLKPGQRKILFCSF Sbjct: 622 NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 681 Query: 362 KRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTIIGLAQNFVGSNNINLFNPEGQFGSRI 541 KRN + K+SQFSGYVSEHSAYHHGEQSLASTIIG+AQ+FVGSNNINL P GQFG+R Sbjct: 682 KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 741 Query: 542 KG 547 G Sbjct: 742 HG 743 >ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus] Length = 1459 Score = 305 bits (780), Expect = 4e-81 Identities = 144/182 (79%), Positives = 160/182 (87%) Frame = +2 Query: 2 GSTRGWSVKYYKGLGTSTNVEGQEYFHDLDRHKKDFVWGDEEDGDAIEMAFSKKKIEARK 181 G+ GWS+KYYKGLGTST+ EG+EYF L +HKKDF+W D+ DG+AIE+AFSKKKIE RK Sbjct: 562 GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 621 Query: 182 NWLRQFEPGTYLDSKEKLIKYGDFVNKELILFSIADLQRSIPSMVDGLKPGQRKILFCSF 361 NWLRQFEPGT+LD KLIKY DFVNKELILFS+ADLQRSIPSMVDGLKPGQRKILFCSF Sbjct: 622 NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 681 Query: 362 KRNLVSSIKISQFSGYVSEHSAYHHGEQSLASTIIGLAQNFVGSNNINLFNPEGQFGSRI 541 KRN + K+SQFSGYVSEHSAYHHGEQSLASTIIG+AQ+FVGSNNINL P GQFG+R Sbjct: 682 KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 741 Query: 542 KG 547 G Sbjct: 742 HG 743