BLASTX nr result

ID: Coptis21_contig00036726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036726
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40290.1| unknown [Lotus japonicus]                              129   2e-28
ref|XP_002315965.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
gb|ABK92713.1| unknown [Populus trichocarpa]                          129   3e-28
gb|AFK43807.1| unknown [Lotus japonicus]                              128   5e-28
ref|XP_002524392.1| cytochrome B561, putative [Ricinus communis]...   127   9e-28

>gb|AFK40290.1| unknown [Lotus japonicus]
          Length = 243

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/81 (77%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242 WALNFQTSFIPLH-NPQNLIYSILHPLLMVIGFILISGEAILVHRWLPGSRSLKKSVHLC 66
           WAL F++SF+    + Q+LIY+ILHPLLMVIGFI++SGEAILVHRWLPGSRSLKKSVHLC
Sbjct: 31  WALAFKSSFLTHSLSQQDLIYAILHPLLMVIGFIILSGEAILVHRWLPGSRSLKKSVHLC 90

Query: 65  LQGVALAFGIFGIWTKFYGEN 3
           LQGVAL  GIFGIWTKF G+N
Sbjct: 91  LQGVALTSGIFGIWTKFQGQN 111


>ref|XP_002315965.1| predicted protein [Populus trichocarpa] gi|222865005|gb|EEF02136.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/81 (75%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242 WALNFQTSFIPLHNPQ-NLIYSILHPLLMVIGFILISGEAILVHRWLPGSRSLKKSVHLC 66
           WAL F++SF+P    Q +L+Y++LHPLLMVIGFILISGEAILVHRWLPGSR  KKSVHLC
Sbjct: 30  WALVFKSSFLPQSTSQEDLVYAVLHPLLMVIGFILISGEAILVHRWLPGSRGFKKSVHLC 89

Query: 65  LQGVALAFGIFGIWTKFYGEN 3
           LQG+ALA GIFGIWTKF+G +
Sbjct: 90  LQGLALACGIFGIWTKFHGND 110


>gb|ABK92713.1| unknown [Populus trichocarpa]
          Length = 140

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/81 (75%), Positives = 71/81 (87%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242 WALNFQTSFIPLHNPQ-NLIYSILHPLLMVIGFILISGEAILVHRWLPGSRSLKKSVHLC 66
           WAL F++SF+P    Q +L+Y++LHPLLMVIGFILISGEAILVHRWLPGSR  KKSVHLC
Sbjct: 30  WALVFKSSFLPQSTSQEDLVYAVLHPLLMVIGFILISGEAILVHRWLPGSRGFKKSVHLC 89

Query: 65  LQGVALAFGIFGIWTKFYGEN 3
           LQG+ALA GIFGIWTKF+G +
Sbjct: 90  LQGLALACGIFGIWTKFHGND 110


>gb|AFK43807.1| unknown [Lotus japonicus]
          Length = 243

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/81 (76%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242 WALNFQTSFIPLH-NPQNLIYSILHPLLMVIGFILISGEAILVHRWLPGSRSLKKSVHLC 66
           WAL F++SF+    + Q+LIY+ILHPLLMVIGFI++SG+AILVHRWLPGSRSLKKSVHLC
Sbjct: 31  WALAFKSSFLTHSLSQQDLIYAILHPLLMVIGFIILSGKAILVHRWLPGSRSLKKSVHLC 90

Query: 65  LQGVALAFGIFGIWTKFYGEN 3
           LQGVAL  GIFGIWTKF G+N
Sbjct: 91  LQGVALTSGIFGIWTKFQGQN 111


>ref|XP_002524392.1| cytochrome B561, putative [Ricinus communis]
           gi|223536353|gb|EEF38003.1| cytochrome B561, putative
           [Ricinus communis]
          Length = 422

 Score =  127 bits (319), Expect = 9e-28
 Identities = 61/81 (75%), Positives = 73/81 (90%), Gaps = 1/81 (1%)
 Frame = -2

Query: 242 WALNFQTSFIPLHNP-QNLIYSILHPLLMVIGFILISGEAILVHRWLPGSRSLKKSVHLC 66
           WAL F++SF+P  +  ++LIY++LHPLLMVIGFIL+SGEAILVHRWLPGS +LKKSVHLC
Sbjct: 29  WALLFKSSFLPQSSSHEDLIYAVLHPLLMVIGFILLSGEAILVHRWLPGSGNLKKSVHLC 88

Query: 65  LQGVALAFGIFGIWTKFYGEN 3
           LQGVALA GIFGIWTKF G++
Sbjct: 89  LQGVALASGIFGIWTKFQGKD 109



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
 Frame = -2

Query: 242 WALNFQ--TSFIPLHNPQNLIYSILHPLLMVIGFILISGEAILVHRWLPGSRSLKKSVHL 69
           W  +F+   S         LI+++ HP+L+VI  IL++GEA+L ++ + G++SL+K+VHL
Sbjct: 209 WTFHFRGGVSLSSTTKDLTLIFNV-HPVLLVISLILLNGEAMLAYKTVSGTKSLRKTVHL 267

Query: 68  CLQGVALAFGIFGIWTKFYGEN 3
            +Q V     + G+W  ++  N
Sbjct: 268 TIQSVVFLLSVIGVWAAYWFHN 289


Top