BLASTX nr result

ID: Coptis21_contig00036719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036719
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]        110   1e-22
emb|CBI36904.3| unnamed protein product [Vitis vinifera]              110   1e-22
ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]           109   2e-22
ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]   108   3e-22

>ref|XP_002269237.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 1011

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/109 (55%), Positives = 73/109 (66%)
 Frame = +2

Query: 2    RHRMRAGGSSPSLSNKQVGGDVLGCLSNQRQPMEDVGNTEVWNNSPLRQNRPNFDLQELL 181
            R+R +A   SP  SNKQ G D+L   ++ RQPM DVGN E   NS +RQ + +FDL+ELL
Sbjct: 768  RYRTKASDLSPFHSNKQAG-DMLDDQNSCRQPMGDVGNIEARGNSMMRQKKQSFDLEELL 826

Query: 182  MDSPPWPPVNGLGLDFQKEDEKDMGYGDWVDKVMVNKLDGVNRNEKPLG 328
             +SPPWPPV+   +    ED+KDMG G WVDKVMVNK D V R   PLG
Sbjct: 827  GNSPPWPPVSS-SVQNYVEDDKDMGSGQWVDKVMVNKQDAVPRVGNPLG 874


>emb|CBI36904.3| unnamed protein product [Vitis vinifera]
          Length = 1017

 Score =  110 bits (275), Expect = 1e-22
 Identities = 60/109 (55%), Positives = 73/109 (66%)
 Frame = +2

Query: 2    RHRMRAGGSSPSLSNKQVGGDVLGCLSNQRQPMEDVGNTEVWNNSPLRQNRPNFDLQELL 181
            R+R +A   SP  SNKQ G D+L   ++ RQPM DVGN E   NS +RQ + +FDL+ELL
Sbjct: 774  RYRTKASDLSPFHSNKQAG-DMLDDQNSCRQPMGDVGNIEARGNSMMRQKKQSFDLEELL 832

Query: 182  MDSPPWPPVNGLGLDFQKEDEKDMGYGDWVDKVMVNKLDGVNRNEKPLG 328
             +SPPWPPV+   +    ED+KDMG G WVDKVMVNK D V R   PLG
Sbjct: 833  GNSPPWPPVSS-SVQNYVEDDKDMGSGQWVDKVMVNKQDAVPRVGNPLG 880


>ref|XP_003536876.1| PREDICTED: kinesin-4-like [Glycine max]
          Length = 1010

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = +2

Query: 2    RHRMRAGGSSPSLSNKQVGGDV--LGCLSNQRQPMEDVGNTEVWNNSPLRQNRPNFDLQE 175
            ++R RAG  SP  +N++ G D+  LGC    RQPM DVGN E+ +N+PLRQ   ++D  E
Sbjct: 768  KYRTRAGEVSPYHANQR-GADIVSLGC----RQPMLDVGNIELHSNTPLRQKTQSYDFDE 822

Query: 176  LLMDSPPWPPVNGLGLDFQKEDEKDMGYGDWVDKVMVNKLDGVNRNEKPLG 328
            +  +SPPWPP+N LGL++  +D+++ G G+WVDKVMVNKLD  N+ E  LG
Sbjct: 823  MSTNSPPWPPLNNLGLNY-GDDDRETGSGEWVDKVMVNKLDATNKTENILG 872


>ref|XP_002302736.1| predicted protein [Populus trichocarpa] gi|222844462|gb|EEE82009.1|
            predicted protein [Populus trichocarpa]
          Length = 1003

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/108 (55%), Positives = 71/108 (65%)
 Frame = +2

Query: 5    HRMRAGGSSPSLSNKQVGGDVLGCLSNQRQPMEDVGNTEVWNNSPLRQNRPNFDLQELLM 184
            HR +   SSP  SN ++G D     ++ RQPM DVGN EV   S  RQ R +FDL E+L 
Sbjct: 759  HRRKESESSPFNSNHRLG-DANDSNASFRQPMGDVGNIEVHTKSAPRQKRQSFDLDEILA 817

Query: 185  DSPPWPPVNGLGLDFQKEDEKDMGYGDWVDKVMVNKLDGVNRNEKPLG 328
            +SPPWPPV   G  +  EDEK+MG G+WVDKVMVNK D VNR EK LG
Sbjct: 818  NSPPWPPVISPGQKY-PEDEKEMGSGEWVDKVMVNKQDAVNRVEKSLG 864


>emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]
          Length = 1172

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/109 (55%), Positives = 72/109 (66%)
 Frame = +2

Query: 2    RHRMRAGGSSPSLSNKQVGGDVLGCLSNQRQPMEDVGNTEVWNNSPLRQNRPNFDLQELL 181
            R R +A   SP  SNKQ G D+L   ++ RQPM DVGN E   NS +RQ + +FDL+ELL
Sbjct: 786  RXRTKASDLSPFHSNKQAG-DMLDDQNSCRQPMGDVGNIEARXNSMMRQKKQSFDLEELL 844

Query: 182  MDSPPWPPVNGLGLDFQKEDEKDMGYGDWVDKVMVNKLDGVNRNEKPLG 328
             +SPPWPPV+   +    ED+KDMG G WVDKVMVNK D V R   PLG
Sbjct: 845  GNSPPWPPVSS-SVQNYVEDDKDMGSGQWVDKVMVNKQDAVPRVGNPLG 892


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