BLASTX nr result

ID: Coptis21_contig00036715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036715
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532211.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_003573794.1| PREDICTED: uncharacterized protein LOC100834...    80   2e-13
ref|XP_003542189.1| PREDICTED: uncharacterized protein LOC100802...    80   2e-13
dbj|BAK03178.1| predicted protein [Hordeum vulgare subsp. vulgare]     80   2e-13
ref|XP_002445357.1| hypothetical protein SORBIDRAFT_07g012110 [S...    79   3e-13

>ref|XP_002532211.1| conserved hypothetical protein [Ricinus communis]
           gi|223528107|gb|EEF30180.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/56 (67%), Positives = 41/56 (73%)
 Frame = +2

Query: 2   SSKDGVRVWPFLVLSCFGGAYALLPYFALWKXXXXXXXXXXXGRWPLNFLESKLTA 169
           SSK  + VWPFLVLSCFGGAYALLPYF LW+           G+WPLNFLESKLTA
Sbjct: 172 SSKSKIPVWPFLVLSCFGGAYALLPYFVLWRPPPPPVEESELGKWPLNFLESKLTA 227


>ref|XP_003573794.1| PREDICTED: uncharacterized protein LOC100834119 isoform 1
           [Brachypodium distachyon]
          Length = 335

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 37/58 (63%), Positives = 41/58 (70%)
 Frame = +2

Query: 2   SSKDGVRVWPFLVLSCFGGAYALLPYFALWKXXXXXXXXXXXGRWPLNFLESKLTAVV 175
           SS+  + VWPFLVLSCFGGAYAL+PYF LWK           G+WPL FLESKLTA V
Sbjct: 175 SSQSKIPVWPFLVLSCFGGAYALIPYFVLWKPPPPAIDEDEIGQWPLKFLESKLTAGV 232


>ref|XP_003542189.1| PREDICTED: uncharacterized protein LOC100802797 [Glycine max]
          Length = 331

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/58 (60%), Positives = 41/58 (70%)
 Frame = +2

Query: 2   SSKDGVRVWPFLVLSCFGGAYALLPYFALWKXXXXXXXXXXXGRWPLNFLESKLTAVV 175
           SSK+ + VWPFL+LSCFGGAY LLPYF LWK             WPLNFLESK+TA++
Sbjct: 173 SSKNNIPVWPFLILSCFGGAYVLLPYFVLWKPPAPPVEETQLKTWPLNFLESKVTAMI 230


>dbj|BAK03178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 353

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/70 (57%), Positives = 46/70 (65%)
 Frame = +2

Query: 2   SSKDGVRVWPFLVLSCFGGAYALLPYFALWKXXXXXXXXXXXGRWPLNFLESKLTAVVWI 181
           SSK  + VWPFLVLSC GGAYAL+PYF LWK           G+WPL FLESK+TA V I
Sbjct: 191 SSKSKIPVWPFLVLSCIGGAYALIPYFVLWKPPPPAIDEDEIGQWPLKFLESKITAGV-I 249

Query: 182 FYIYLTTSLF 211
           F + L   +F
Sbjct: 250 FAVGLGLIIF 259


>ref|XP_002445357.1| hypothetical protein SORBIDRAFT_07g012110 [Sorghum bicolor]
           gi|241941707|gb|EES14852.1| hypothetical protein
           SORBIDRAFT_07g012110 [Sorghum bicolor]
          Length = 347

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = +2

Query: 2   SSKDGVRVWPFLVLSCFGGAYALLPYFALWKXXXXXXXXXXXGRWPLNFLESKLTAVV 175
           SSK  + VWPFLVLSC GGAYAL+PYF LWK           G+WPL FLESKLTA V
Sbjct: 187 SSKSKIPVWPFLVLSCIGGAYALIPYFVLWKPPPPPIDEDEIGQWPLKFLESKLTAGV 244


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