BLASTX nr result

ID: Coptis21_contig00036691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036691
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149275.1| PREDICTED: reticulon-like protein B17-like [...    79   4e-13
emb|CBI21893.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002275156.2| PREDICTED: reticulon-like protein B17-like [...    68   7e-10
ref|XP_002309754.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002328044.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09

>ref|XP_004149275.1| PREDICTED: reticulon-like protein B17-like [Cucumis sativus]
           gi|449505436|ref|XP_004162469.1| PREDICTED:
           reticulon-like protein B17-like [Cucumis sativus]
          Length = 426

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
 Frame = -3

Query: 316 KSRASPMGVMGCASPXXXXXXXXRLDQESKEERELLVVLGDENVXXXXXXXXXXXXXXXP 137
           ++R   +G+MGCASP        R + E++EER+L   L +E V                
Sbjct: 88  RNRGPQLGLMGCASPRSIRRSRRRSEVETREERDLC--LAEEFVKARKRKQSGRSKKEKL 145

Query: 136 SVAP------SSLSPKTHDDDESSLDTMRQLVSDLIMWKDVAKSALWFGLG 2
           S+ P      SS +PK  +D+  SLD + QL++DLIMWKDVAKS+LWFGLG
Sbjct: 146 SLVPVPSTPSSSTTPKLDNDENGSLDQIGQLITDLIMWKDVAKSSLWFGLG 196


>emb|CBI21893.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
 Frame = -3

Query: 298 MGVMGCASPXXXXXXXXRLDQESKEERELLVV--LGDENVXXXXXXXXXXXXXXXPSVAP 125
           MGV+GCASP        R++Q+ +E+++  +   +G                   PSV  
Sbjct: 1   MGVLGCASPRNTRRPRRRVEQDVREDKDFGMAEEMGKLRKRRHSGRSRKEKLSLVPSVPS 60

Query: 124 SSLSPKTHDDDESSLDTMRQLVSDLIMWKDVAKSALWFGLG 2
           SS SPK ++DD S+L  + QLV+DLIMWKD +KS+ WFG G
Sbjct: 61  SSSSPKANEDDLSNLHRIGQLVTDLIMWKDASKSSFWFGFG 101


>ref|XP_002275156.2| PREDICTED: reticulon-like protein B17-like [Vitis vinifera]
          Length = 429

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/105 (37%), Positives = 57/105 (54%)
 Frame = -3

Query: 316 KSRASPMGVMGCASPXXXXXXXXRLDQESKEERELLVVLGDENVXXXXXXXXXXXXXXXP 137
           KSR S MGV+GCASP        R++Q+ +E+++    + +E                  
Sbjct: 98  KSRISQMGVLGCASPRNTRRPRRRVEQDVREDKDF--GMAEEMGKLRKRRHSGRSRKEKL 155

Query: 136 SVAPSSLSPKTHDDDESSLDTMRQLVSDLIMWKDVAKSALWFGLG 2
           S+ PS  S  +  +D S+L  + QLV+DLIMWKD +KS+ WFG G
Sbjct: 156 SLVPSVPSSSSSPNDLSNLHRIGQLVTDLIMWKDASKSSFWFGFG 200


>ref|XP_002309754.1| predicted protein [Populus trichocarpa] gi|222852657|gb|EEE90204.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/105 (38%), Positives = 56/105 (53%)
 Frame = -3

Query: 316 KSRASPMGVMGCASPXXXXXXXXRLDQESKEERELLVVLGDENVXXXXXXXXXXXXXXXP 137
           K+R S  G +GCASP        RL+ ES+EER+L+ ++ DE                  
Sbjct: 108 KTRGSQTGSLGCASPRSNRRLRRRLEVESREERDLIGLV-DEVGKVRKRRHSGRSKKEKE 166

Query: 136 SVAPSSLSPKTHDDDESSLDTMRQLVSDLIMWKDVAKSALWFGLG 2
            ++     P ++     +LD +  +V DLIMWKDVAKS+LWFGLG
Sbjct: 167 KLSLVHSFPSSNSTTSINLDRIGMVVYDLIMWKDVAKSSLWFGLG 211


>ref|XP_002328044.1| predicted protein [Populus trichocarpa] gi|222837453|gb|EEE75832.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 42/105 (40%), Positives = 55/105 (52%)
 Frame = -3

Query: 316 KSRASPMGVMGCASPXXXXXXXXRLDQESKEERELLVVLGDENVXXXXXXXXXXXXXXXP 137
           KSR S MG +GCASP        RL+ ES EER+L+  +  + V                
Sbjct: 105 KSRGSQMGSLGCASPRSNRRLRRRLEVESMEERDLIGFV--DEVGKVRKRRHSGRSKKEK 162

Query: 136 SVAPSSLSPKTHDDDESSLDTMRQLVSDLIMWKDVAKSALWFGLG 2
                +L  K  + D  +L+ +  +V DLIMWKDVAKS+LWFGLG
Sbjct: 163 EKEKEALF-KVDEGDGVNLERIGMVVYDLIMWKDVAKSSLWFGLG 206


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