BLASTX nr result

ID: Coptis21_contig00036690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036690
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14939.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002277204.1| PREDICTED: uncharacterized protein LOC100243...    65   6e-09
ref|XP_002511308.1| conserved hypothetical protein [Ricinus comm...    62   4e-08
ref|XP_002318087.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002322201.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>emb|CBI14939.3| unnamed protein product [Vitis vinifera]
          Length = 303

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -1

Query: 113 MQDPIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQ 3
           MQDPIGIP CFS+ +K TDDPAAVTRSGQSVFM VY+
Sbjct: 21  MQDPIGIPACFSSVEKQTDDPAAVTRSGQSVFMYVYR 57


>ref|XP_002277204.1| PREDICTED: uncharacterized protein LOC100243254 [Vitis vinifera]
          Length = 307

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = -1

Query: 113 MQDPIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQ 3
           MQDPIGIP CFS+ +K TDDPAAVTRSGQSVFM VY+
Sbjct: 1   MQDPIGIPACFSSVEKQTDDPAAVTRSGQSVFMYVYR 37


>ref|XP_002511308.1| conserved hypothetical protein [Ricinus communis]
           gi|223550423|gb|EEF51910.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 325

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/38 (76%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = -1

Query: 113 MQD-PIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQ 3
           MQD PIGIP CF++G+K TDDPA +TRSGQSVFMSVY+
Sbjct: 1   MQDHPIGIPACFTSGEKLTDDPATITRSGQSVFMSVYR 38


>ref|XP_002318087.1| predicted protein [Populus trichocarpa] gi|222858760|gb|EEE96307.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 116 MMQDPIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQ 3
           M+  PIGIP CF++ DK TDDPA VTRSGQSVF+SVY+
Sbjct: 1   MLDHPIGIPACFTSSDKVTDDPATVTRSGQSVFVSVYR 38


>ref|XP_002322201.1| predicted protein [Populus trichocarpa] gi|222869197|gb|EEF06328.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/38 (73%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
 Frame = -1

Query: 113 MQD-PIGIPTCFSAGDKPTDDPAAVTRSGQSVFMSVYQ 3
           MQD PIGIP CF++G+K  DDPA VTRSGQSVFMS Y+
Sbjct: 1   MQDHPIGIPACFTSGEKVADDPATVTRSGQSVFMSAYR 38


Top