BLASTX nr result

ID: Coptis21_contig00036671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036671
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267...    87   1e-15
ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
emb|CBI25355.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_003588458.1| hypothetical protein MTR_1g007460 [Medicago ...    75   4e-12
ref|NP_001045796.1| Os02g0132200 [Oryza sativa Japonica Group] g...    74   1e-11

>ref|XP_002275231.1| PREDICTED: uncharacterized protein LOC100267305 [Vitis vinifera]
          Length = 616

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 62/136 (45%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
 Frame = +2

Query: 38  TNISSGNRQTKEYPL---SSSALISEHKGGCGNFENAERLFNNENSGPPCLASDCGNEML 208
           +N    N Q +  P+    S +L SE KGG G+    ER      S          +E+L
Sbjct: 352 SNNMPANLQIRGNPMLVNKSMSLSSEDKGGDGDSRMIERRLVARTSCASSSTPTNEDEIL 411

Query: 209 TLKLSSSITTAXXXXXXXXXXXXXXXXXXX---IKAATVASQWLELLQQDIRGRLAALRR 379
            LKLSSS T A                      +KAATVASQWLELL QDI+GRLAALRR
Sbjct: 412 ALKLSSSQTKASENISSLSNDEPMNLNSVTSLSVKAATVASQWLELLHQDIKGRLAALRR 471

Query: 380 SKKRVQDVIQTELPFL 427
           SKKRV+ VI TELPFL
Sbjct: 472 SKKRVRAVIHTELPFL 487


>ref|XP_002325486.1| predicted protein [Populus trichocarpa] gi|222862361|gb|EEE99867.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 55/127 (43%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
 Frame = +2

Query: 53  GNRQTKEYPLSSSALISEHKGGCGNFENAERLFNNENSGPPCLASDCGNEMLTLKLSSSI 232
           G++QT+ YP+S+         G G+    + + ++ N      AS+  N+ LTLKLSSS 
Sbjct: 347 GSKQTRGYPISN---------GEGDSSMVD-MVHDRNFVSHSAASE--NDGLTLKLSSST 394

Query: 233 TTAXXXXXXXXXXXXXXXXXXX--IKAATVASQWLELLQQDIRGRLAALRRSKKRVQDVI 406
                                   +KAATV+SQWLELL QDIRGR+AALRRS+KRV+ VI
Sbjct: 395 NALEESRTVLNEESANNASVSCLSVKAATVSSQWLELLHQDIRGRIAALRRSRKRVRAVI 454

Query: 407 QTELPFL 427
            TELPFL
Sbjct: 455 TTELPFL 461


>emb|CBI25355.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/80 (58%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = +2

Query: 197 NEMLTLKLSSSITTAXXXXXXXXXXXXXXXXXXX---IKAATVASQWLELLQQDIRGRLA 367
           +E+L LKLSSS T A                      +KAATVASQWLELL QDI+GRLA
Sbjct: 351 DEILALKLSSSQTKASENISSLSNDEPMNLNSVTSLSVKAATVASQWLELLHQDIKGRLA 410

Query: 368 ALRRSKKRVQDVIQTELPFL 427
           ALRRSKKRV+ VI TELPFL
Sbjct: 411 ALRRSKKRVRAVIHTELPFL 430


>ref|XP_003588458.1| hypothetical protein MTR_1g007460 [Medicago truncatula]
           gi|355477506|gb|AES58709.1| hypothetical protein
           MTR_1g007460 [Medicago truncatula]
          Length = 585

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
 Frame = +2

Query: 149 FNNENSGPPCLASDCGN----EMLTLKLSSSI--TTAXXXXXXXXXXXXXXXXXXXIKAA 310
           +N E +G    AS+  +    ++L+LKLSSS+  + +                   +KAA
Sbjct: 360 YNVEKAGLKDCASNASHVTEDDILSLKLSSSMKASVSSTNMSNEESSNVTTVSSLSLKAA 419

Query: 311 TVASQWLELLQQDIRGRLAALRRSKKRVQDVIQTELPFL 427
           TVASQWLELL QDI+GRLAALRRS++RV+ VI TELPFL
Sbjct: 420 TVASQWLELLHQDIKGRLAALRRSRRRVRSVITTELPFL 458


>ref|NP_001045796.1| Os02g0132200 [Oryza sativa Japonica Group]
           gi|113535327|dbj|BAF07710.1| Os02g0132200 [Oryza sativa
           Japonica Group] gi|125537963|gb|EAY84358.1| hypothetical
           protein OsI_05733 [Oryza sativa Indica Group]
           gi|125580700|gb|EAZ21631.1| hypothetical protein
           OsJ_05260 [Oryza sativa Japonica Group]
          Length = 555

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/43 (81%), Positives = 41/43 (95%)
 Frame = +2

Query: 299 IKAATVASQWLELLQQDIRGRLAALRRSKKRVQDVIQTELPFL 427
           +KAA VASQWLELLQQDIRGRLAAL+RSKKRV++ +QTELP+L
Sbjct: 387 VKAANVASQWLELLQQDIRGRLAALKRSKKRVRNALQTELPYL 429


Top