BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036670
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    99   4e-19
ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein A...    99   7e-19
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S...    99   7e-19
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    98   9e-19
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...    98   9e-19

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 67/199 (33%), Positives = 98/199 (49%), Gaps = 9/199 (4%)
 Frame = +3

Query: 15   NHAHMSRIIWQVITNPNSFLCQQLKGKYFHNTTVFQSTIKQGASWFWYGFQKYIKSVKVN 194
            N A ++R  W++I  PNS   Q LK KYF + ++  +T    AS  W+G +  +  +K  
Sbjct: 1502 NQALLTRQAWRLIEFPNSLCAQVLKAKYFPHGSLTDTTFSANASPTWHGIEYGLDLLKKG 1561

Query: 195  SIWKIGLGMIIDIWKDPWIPGIHEGKVPVSNIANPAYKTVSDLINPCTRTWKVDILNQLF 374
             IW+IG G  + IW+DPWIP     + PVS+ AN   K VSDLI     TW    +NQ F
Sbjct: 1562 IIWRIGNGNSVRIWRDPWIPR-DLSRRPVSSKANCRLKWVSDLIAE-DGTWDSAKINQYF 1619

Query: 375  DTDTSIQIQNIFLSRSHLQDTLKWISTRKGEHSVKSMYHV---------LSNQSLMPPNK 527
                +  IQ I +S    +D + W   + G  SV+S Y +          S+ S    NK
Sbjct: 1620 LKIDADIIQKICISARLEEDFIAWHPDKTGRFSVRSAYKLALQLADMNNCSSSSSSRLNK 1679

Query: 528  TNLGFWQNDNQPRAALFAW 584
            +    W+ +   +  +FAW
Sbjct: 1680 SWELIWKCNVPQKVRIFAW 1698


>ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 776

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
 Frame = +3

Query: 3   MSINNHAHMSRIIWQVITNPNSFLCQQLKGKYFHNTTVFQSTIKQGASWFWYGFQKYIKS 182
           M++ N A +++  W++I  P+SF  + +K KYF +  +  + + Q +S  W G +  +  
Sbjct: 54  MALFNQALLAKQAWRLIDKPDSFCARLIKAKYFPHGNLLDTAVIQSSSPVWQGIKHGLDL 113

Query: 183 VKVNSIWKIGLGMIIDIWKDPWIPGIHEGKVPVSNIA-NPAYKTVSDLINPCTRTWKVDI 359
           +K   IW+IG G  +DIW+  W+P    G + VS  A N   + VSDL+ P   TW  ++
Sbjct: 114 LKKGYIWRIGNGRSVDIWRHNWLP---RGNLQVSGTAGNTRLRRVSDLMLPGLHTWNEEL 170

Query: 360 LNQLFDTDTSIQIQNIFLSRSHLQDTLKWISTRKGEHSVKSMYHVL-----------SNQ 506
           ++Q+F    +  I  I L    + D + W   + G  SVKS Y +            S+ 
Sbjct: 171 IHQIFYPHDADAILQITLPNYDVDDVVAWQPEKLGFFSVKSAYRLALDASSGEQSGSSSN 230

Query: 507 SLMPPNKTNLGFWQNDNQPRAALFAW 584
           S     K     W+    P+  +F W
Sbjct: 231 SPQGDRKIWDVIWKAAVPPKVRIFGW 256


>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
           gi|241941323|gb|EES14468.1| hypothetical protein
           SORBIDRAFT_07g002160 [Sorghum bicolor]
          Length = 469

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 16/206 (7%)
 Frame = +3

Query: 15  NHAHMSRIIWQVITNPNSFLCQQLKGKYFHNTTVFQSTIKQGASWFWYGFQKYIKSVKVN 194
           N A ++R  W+++ NP+S   + L+ KYF +  +     K G S+ W    + ++++K  
Sbjct: 27  NLAMLARQGWRLLLNPDSLCARVLRSKYFSDGDLLSVVEKPGISYAWRSIVRGVQALKDG 86

Query: 195 SIWKIGLGMIIDIWKDPWIP-GIHEGKVPVSNIANPAYKTVSDLINPCTRTWKVDILNQL 371
            IW++G G  I+IW DPWIP G+   + P +         VS+LI+P +  W  +++  +
Sbjct: 87  LIWRVGDGTQINIWTDPWIPQGV--TRRPCTPRGQTILNKVSELIDPISGEWDRNLVTDI 144

Query: 372 FDTDTSIQIQNIFLSRSHLQDTLKWISTRKGEHSVKSMYHVLSNQ--------------S 509
           F       I +I L ++ ++DTL W    KG+ SVKS YHVL++               S
Sbjct: 145 FWEADVKNILSIPL-KNEMEDTLAWHYDPKGDFSVKSAYHVLTDMKELSKRRQIGEASAS 203

Query: 510 LMPPNKTNL-GFWQNDNQPRAALFAW 584
           L+ P   N    W+    P+  LF W
Sbjct: 204 LISPCNNNWHKIWKLHCPPKVKLFFW 229


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 51/159 (32%), Positives = 86/159 (54%)
 Frame = +3

Query: 15  NHAHMSRIIWQVITNPNSFLCQQLKGKYFHNTTVFQSTIKQGASWFWYGFQKYIKSVKVN 194
           N A +++ +W+++++P+S   + L+ +Y+ +  +  + +K G+S+ W      ++  K  
Sbjct: 326 NLALLAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQG 385

Query: 195 SIWKIGLGMIIDIWKDPWIPGIHEGKVPVSNIANPAYKTVSDLINPCTRTWKVDILNQLF 374
            IW++G G  I IW+D WIPG H  K+  +N  N    TV +LI+P   TW  D+L  +F
Sbjct: 386 YIWRVGDGTQIKIWEDNWIPGSHNMKIQ-TNRGNNLVATVDELIDPINFTWGGDLLKTIF 444

Query: 375 DTDTSIQIQNIFLSRSHLQDTLKWISTRKGEHSVKSMYH 491
                 +I  I + R+   D + W   R G  SVKS YH
Sbjct: 445 WPIDVCRIMQIPI-RAGRDDLVAWQYNRSGTFSVKSAYH 482


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score = 98.2 bits (243), Expect = 9e-19
 Identities = 51/159 (32%), Positives = 86/159 (54%)
 Frame = +3

Query: 15  NHAHMSRIIWQVITNPNSFLCQQLKGKYFHNTTVFQSTIKQGASWFWYGFQKYIKSVKVN 194
           N A +++ +W+++++P+S   + L+ +Y+ +  +  + +K G+S+ W      ++  K  
Sbjct: 356 NLALLAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQG 415

Query: 195 SIWKIGLGMIIDIWKDPWIPGIHEGKVPVSNIANPAYKTVSDLINPCTRTWKVDILNQLF 374
            IW++G G  I IW+D WIPG H  K+  +N  N    TV +LI+P   TW  D+L  +F
Sbjct: 416 YIWRVGDGTQIKIWEDNWIPGSHNMKIQ-TNRGNNLVATVDELIDPINFTWGGDLLKTIF 474

Query: 375 DTDTSIQIQNIFLSRSHLQDTLKWISTRKGEHSVKSMYH 491
                 +I  I + R+   D + W   R G  SVKS YH
Sbjct: 475 WPIDVCRIMQIPI-RAGRDDLVAWQYNRSGTFSVKSAYH 512