BLASTX nr result

ID: Coptis21_contig00036668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036668
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   2e-10
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...    64   4e-10
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-09
emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera]    61   2e-09
emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   3e-09

>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 63.9 bits (154), Expect(2) = 2e-10
 Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = +2

Query: 200 QELAIKVGSFPETYLGVPIVQGRVTKVV--NCVLDKIKKRLTSWSGKLLSFQG*ATLIKS 373
           + L  KVGSFP TYLG+P V G  +K+   + +++KI K+L+ W G LLS  G  TLIK+
Sbjct: 733 KNLCCKVGSFPITYLGMP-VGGSCSKLSFWDPLIEKISKKLSLWKGNLLSLGGRLTLIKA 791

Query: 374 GLCSSPINNMAIYKWPKGLYER 439
            L + PI  M+++  P+G+ ++
Sbjct: 792 SLLNLPIYYMSLFPMPQGVIDK 813



 Score = 25.8 bits (55), Expect(2) = 2e-10
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 415 MAKGIIREAETLMRNYLWSG 474
           M +G+I +   + RN+LWSG
Sbjct: 806 MPQGVIDKITRIQRNFLWSG 825


>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score = 64.3 bits (155), Expect(2) = 4e-10
 Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
 Frame = +2

Query: 206 LAIKVGSFPETYLGVPIVQGRVT-KVVNCVLDKIKKRLTSWSGKLLSFQG*ATLIKSGLC 382
           L  K+G+ P +YLG+PI       +  + ++DK++K+L SW GKLLS  G  TLIK+ L 
Sbjct: 736 LMCKIGTIPFSYLGLPIGDNPARIRTWDPIIDKLEKKLASWKGKLLSLGGRLTLIKASLS 795

Query: 383 SSPINNMAIYKWPKGLYER 439
           + P+  M+++  PKG+ E+
Sbjct: 796 NLPLYYMSLFPVPKGVIEK 814



 Score = 24.6 bits (52), Expect(2) = 4e-10
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 421 KGIIREAETLMRNYLWSG 474
           KG+I +   LMR +LW G
Sbjct: 809 KGVIEKINKLMRAFLWCG 826


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 60.1 bits (144), Expect(3) = 2e-09
 Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
 Frame = +2

Query: 206 LAIKVGSFPETYLGVPIVQGRVTKVV--NCVLDKIKKRLTSWSGKLLSFQG*ATLIKSGL 379
           L  KVGS P TYLG+PI  G  +++     V++K+ ++L  W  K+LS  G  TLIKS L
Sbjct: 735 LQCKVGSIPFTYLGLPI-GGNPSRIQFWKPVIEKLCEKLAMWKSKMLSIGGRLTLIKSSL 793

Query: 380 CSSPINNMAIYKWPKGLYER 439
            S P+  M+++  PKG+ E+
Sbjct: 794 ASLPLYFMSLFPIPKGVVEK 813



 Score = 23.9 bits (50), Expect(3) = 2e-09
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 421 KGIIREAETLMRNYLWSG 474
           KG++ +   + R +LWSG
Sbjct: 808 KGVVEKINMITRRFLWSG 825



 Score = 21.9 bits (45), Expect(3) = 2e-09
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 16  HLLFADDIFVFAK*DIRGIRYIKELFEKYEILRCLLGN 129
           HL +ADD  VF+      ++ IK     ++++  L  N
Sbjct: 675 HLQYADDTLVFSDTSTDSLKSIKSTLILFQLVSGLQVN 712


>emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera]
          Length = 1074

 Score = 61.2 bits (147), Expect(2) = 2e-09
 Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
 Frame = +2

Query: 203 ELAIKVGSFPETYLGVPI-VQGRVTKVVNCVLDKIKKRLTSWSGKLLSFQG*ATLIKSGL 379
           EL  +VGS P  YLG+P+ V  R T + + + +++++RL  W  + +S  G  TLIKS L
Sbjct: 648 ELGCRVGSLPSHYLGLPLGVPNRATSMWDGMEERVRRRLALWKRQYISKGGRITLIKSTL 707

Query: 380 CSSPINNMAIYKWPKGLYER 439
            S PI  M+I++ PK + +R
Sbjct: 708 ASMPIYQMSIFRMPKSVAKR 727



 Score = 25.0 bits (53), Expect(2) = 2e-09
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 14/58 (24%)
 Frame = +1

Query: 1   TLGTGHLLFADDIFVF--------------AK*DIRGIRYIKELFEKYEILRCLLGNV 132
           +L   HL FADD  VF              AK +I  +  ++E+ E    L C +G++
Sbjct: 599 SLNISHLFFADDTIVFCEASKEQVSHLINLAKSEIIPVGEVEEILELAAELGCRVGSL 656


>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 60.1 bits (144), Expect(2) = 3e-09
 Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = +2

Query: 206 LAIKVGSFPETYLGVPIVQGRVTKVVNC--VLDKIKKRLTSWSGKLLSFQG*ATLIKSGL 379
           L  KVG  P TYLG+PI  G ++++ +   ++ KI+ +L SW G++LS  G  TLIK+ +
Sbjct: 735 LLCKVGRLPFTYLGLPI-GGNISRLAHWDPIIKKIEGKLASWKGRMLSIAGRITLIKASI 793

Query: 380 CSSPINNMAIYKWPKGLYE 436
            S P+  M+++  P+G+ E
Sbjct: 794 SSLPLYYMSLFPAPRGVIE 812



 Score = 25.8 bits (55), Expect(2) = 3e-09
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 421 KGIIREAETLMRNYLWSG 474
           +G+I     L RN+LWSG
Sbjct: 808 RGVIEAINKLQRNFLWSG 825


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