BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036612
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              192   2e-47
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   186   2e-45
ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
ref|XP_002526196.1| pentatricopeptide repeat-containing protein,...   172   3e-41

>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/109 (83%), Positives = 101/109 (92%)
 Frame = +1

Query: 1   EGWKIFKSMSRVYGIEPGVQHYGCLVDLFGRAGKLEEAKRVVREMPMEPDSYVLGALLNA 180
           EG +IFKSM+ +YGIEP VQHYGCLVDL GRAG LE+AKRVVREMP+EPDSYVLGALLNA
Sbjct: 364 EGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNA 423

Query: 181 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASENRWEDVAKVRK 327
           CR+HGDVELGKETV+ L +RSLDHGGVHVLLSN+YAS N+WEDVAKVRK
Sbjct: 424 CRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRK 472


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  192 bits (488), Expect = 2e-47
 Identities = 91/109 (83%), Positives = 101/109 (92%)
 Frame = +1

Query: 1   EGWKIFKSMSRVYGIEPGVQHYGCLVDLFGRAGKLEEAKRVVREMPMEPDSYVLGALLNA 180
           EG +IFKSM+ +YGIEP VQHYGCLVDL GRAG LE+AKRVVREMP+EPDSYVLGALLNA
Sbjct: 339 EGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNA 398

Query: 181 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASENRWEDVAKVRK 327
           CR+HGDVELGKETV+ L +RSLDHGGVHVLLSN+YAS N+WEDVAKVRK
Sbjct: 399 CRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRK 447


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  186 bits (472), Expect = 2e-45
 Identities = 88/109 (80%), Positives = 99/109 (90%)
 Frame = +1

Query: 1   EGWKIFKSMSRVYGIEPGVQHYGCLVDLFGRAGKLEEAKRVVREMPMEPDSYVLGALLNA 180
           EG +IF  MS VYGIEPGVQHYGC+VDL GRAG LEEAKR+VREMPMEPDSYVLGALLN+
Sbjct: 359 EGLRIFNCMSVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNS 418

Query: 181 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASENRWEDVAKVRK 327
           CR+HGDVELGKETV+SL++R LDHGGVHVLLSN+YAS N+W+ V KVRK
Sbjct: 419 CRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRK 467


>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/109 (74%), Positives = 98/109 (89%)
 Frame = +1

Query: 1   EGWKIFKSMSRVYGIEPGVQHYGCLVDLFGRAGKLEEAKRVVREMPMEPDSYVLGALLNA 180
           EG +IF+SMS  Y IEP +QHYGCLVDL GRAGK+EEAK+VVREMP++PDSY LGALL+A
Sbjct: 363 EGLRIFESMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDA 422

Query: 181 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASENRWEDVAKVRK 327
           CR+HGDV+LG+E VDSL+QR LDHGGVHVLLSN+YAS ++WED +K+RK
Sbjct: 423 CRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRK 471


>ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534500|gb|EEF36200.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  172 bits (435), Expect = 3e-41
 Identities = 79/109 (72%), Positives = 100/109 (91%)
 Frame = +1

Query: 1   EGWKIFKSMSRVYGIEPGVQHYGCLVDLFGRAGKLEEAKRVVREMPMEPDSYVLGALLNA 180
           +G +IF++MS++YG EP VQHYGCLVDL GRAGKLEEAK++V+EMPM+PDSYVLGALLNA
Sbjct: 362 KGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNA 421

Query: 181 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASENRWEDVAKVRK 327
            R++GDVELG+ETV+SL Q SLDH GVHV+LSN+YAS N+W++VA+VR+
Sbjct: 422 SRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRR 470