BLASTX nr result

ID: Coptis21_contig00036601 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036601
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308934.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002278603.2| PREDICTED: kinesin-4-like [Vitis vinifera]         74   1e-11
emb|CBI29818.3| unnamed protein product [Vitis vinifera]               74   1e-11
dbj|BAJ53207.1| JHL06B08.9 [Jatropha curcas]                           72   6e-11
ref|XP_002533437.1| kinesin heavy chain, putative [Ricinus commu...    66   3e-09

>ref|XP_002308934.1| predicted protein [Populus trichocarpa] gi|222854910|gb|EEE92457.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 53/101 (52%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = +2

Query: 11   VGTVTPSEFSLSRKSQTPGVAMSTTKKGS-IRKSLMTLGKLINAPDKRNQQHPVRTLPHT 187
            V  +  SE  +S  SQ   +  ST  KGS IRKSL T+GKLIN  DKRNQQ         
Sbjct: 787  VKILVQSELGVSTDSQAANLVRSTHGKGSQIRKSLRTIGKLINGSDKRNQQISKEEFSPI 846

Query: 188  TVNVND---KSMPAADARTLRRQSLTGGQTLGLSRRSSLGG 301
                ND   K+   A+ARTLRRQSLTG QT   SRRSSLGG
Sbjct: 847  IGICNDTDLKTPLTANARTLRRQSLTGVQT-STSRRSSLGG 886


>ref|XP_002278603.2| PREDICTED: kinesin-4-like [Vitis vinifera]
          Length = 977

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
 Frame = +2

Query: 5    KVVGTVTPSEFSLSRKSQTPGVAMSTTKKGS-IRKSLMTLGKLINAPDKRNQQH--PVRT 175
            K V T+  S+ S+S+ SQ P    S   KGS IRKSL T+GKLIN  +KRNQQ     RT
Sbjct: 863  KEVQTMMQSDLSVSKDSQIPSFISSGNGKGSQIRKSLRTIGKLINGSEKRNQQKLMEART 922

Query: 176  LPHTTVNVNDKSMP-AADARTLRRQSLTGGQTLGLSRRSSLG-GNDSCS 316
                + N      P  A+AR +RRQSLTG QT G  R S +G  +DSCS
Sbjct: 923  PIKGSNNAEGGRSPLTANARAMRRQSLTGIQTSGPWRSSVIGKSSDSCS 971


>emb|CBI29818.3| unnamed protein product [Vitis vinifera]
          Length = 992

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
 Frame = +2

Query: 5    KVVGTVTPSEFSLSRKSQTPGVAMSTTKKGS-IRKSLMTLGKLINAPDKRNQQH--PVRT 175
            K V T+  S+ S+S+ SQ P    S   KGS IRKSL T+GKLIN  +KRNQQ     RT
Sbjct: 878  KEVQTMMQSDLSVSKDSQIPSFISSGNGKGSQIRKSLRTIGKLINGSEKRNQQKLMEART 937

Query: 176  LPHTTVNVNDKSMP-AADARTLRRQSLTGGQTLGLSRRSSLG-GNDSCS 316
                + N      P  A+AR +RRQSLTG QT G  R S +G  +DSCS
Sbjct: 938  PIKGSNNAEGGRSPLTANARAMRRQSLTGIQTSGPWRSSVIGKSSDSCS 986


>dbj|BAJ53207.1| JHL06B08.9 [Jatropha curcas]
          Length = 979

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 53/102 (51%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
 Frame = +2

Query: 11   VGTVTPSEFSLSRKSQTPGVAMSTTKKGS-IRKSLMTLGKLINAPDKRNQQHPVRT---L 178
            V  V  +E +L   SQT  +  ST  KGS IRKSL T+GKLIN  +KRNQQ         
Sbjct: 850  VEIVMQNECALPTDSQTSNLISSTNGKGSQIRKSLRTIGKLINGSEKRNQQRSKEAESPA 909

Query: 179  PHTTVNVND-KSMPAADARTLRRQSLTGGQTLGLSRRSSLGG 301
             + T N ND KS   A+ R +RRQSLTG Q+ G SRRSSLGG
Sbjct: 910  INGTGNNNDIKSPITANGRAVRRQSLTGVQSDG-SRRSSLGG 950


>ref|XP_002533437.1| kinesin heavy chain, putative [Ricinus communis]
            gi|223526711|gb|EEF28944.1| kinesin heavy chain, putative
            [Ricinus communis]
          Length = 987

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 50/98 (51%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
 Frame = +2

Query: 29   SEFSLSRKSQTPGVAMSTTKKGS-IRKSLMTLGKLINAPDKRNQQHPVRT---LPHTTVN 196
            SE +L    QT  V  S   KGS IRKSL T+GKLIN  +KR+QQ P      +  T+  
Sbjct: 846  SELALPTDLQTISVINSANGKGSQIRKSLRTIGKLINGSEKRHQQPPKAAESPINCTSNK 905

Query: 197  VND-KSMPAADARTLRRQSLTGGQTLGLSR--RSSLGG 301
             ND KS   A AR +RRQSLTG Q  G  R  RSSLGG
Sbjct: 906  KNDLKSPLTASARAVRRQSLTGIQASGSDRSCRSSLGG 943


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