BLASTX nr result

ID: Coptis21_contig00036592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036592
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3...    97   2e-18
ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3...    97   2e-18
emb|CBI27547.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...    96   3e-18
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...    96   3e-18

>ref|XP_003532715.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1454

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/55 (85%), Positives = 49/55 (89%)
 Frame = -2

Query: 216  SMAGLAATYGLNLNVLQAWAIWNLCNVENKMISVERILQFSSIPSEAPFNIKGYR 52
            S+AGL ATYGLNLNVLQAW IWNLCNVENKMISVERILQFSSIPSEAP  I+  R
Sbjct: 1141 SLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCR 1195


>ref|XP_003524162.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1452

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/55 (85%), Positives = 49/55 (89%)
 Frame = -2

Query: 216  SMAGLAATYGLNLNVLQAWAIWNLCNVENKMISVERILQFSSIPSEAPFNIKGYR 52
            S+AGL ATYGLNLNVLQAW IWNLCNVENKMISVERILQFSSIPSEAP  I+  R
Sbjct: 1139 SLAGLVATYGLNLNVLQAWVIWNLCNVENKMISVERILQFSSIPSEAPLIIQDCR 1193


>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = -2

Query: 216  SMAGLAATYGLNLNVLQAWAIWNLCNVENKMISVERILQFSSIPSEAPFNIKGYR 52
            S+AGLAATYGLNLNVLQAW IWNLCNVENKMISVERILQF+ IPSEAP  I+  R
Sbjct: 1052 SLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLVIENCR 1106


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/55 (83%), Positives = 49/55 (89%)
 Frame = -2

Query: 216  SMAGLAATYGLNLNVLQAWAIWNLCNVENKMISVERILQFSSIPSEAPFNIKGYR 52
            S+AGLAATYGLNLNVLQAW IWNLCNVENKMISVERILQF+ IPSEAP  I+  R
Sbjct: 1151 SLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLVIENCR 1205


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/55 (83%), Positives = 50/55 (90%)
 Frame = -2

Query: 216  SMAGLAATYGLNLNVLQAWAIWNLCNVENKMISVERILQFSSIPSEAPFNIKGYR 52
            S+AGLAATYGLNLNVLQAW IWNLCNVENKMISVERILQF++IPSEAP  I+  R
Sbjct: 1152 SLAGLAATYGLNLNVLQAWVIWNLCNVENKMISVERILQFTNIPSEAPLVIEDSR 1206


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