BLASTX nr result

ID: Coptis21_contig00036591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00036591
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidop...   145   3e-33
gb|AAC97237.1| putative TNP2-like transposon protein [Arabidopsi...   143   1e-32
gb|AAG51463.1|AC069160_9 CACTA-element transposase, putative [Ar...   143   2e-32
gb|AAG26076.1|AC069299_2 En/Spm-like transposon protein, putativ...   140   1e-31
dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thal...   135   3e-30

>pir||E85079 hypothetical protein AT4g08070 [imported] - Arabidopsis thaliana
           gi|5724773|gb|AAD48077.1|AF160183_4 contains similarity
           to Antirrhinum majus hypothetical protein TNP2
           (GB:X57297); may be a pseudogene [Arabidopsis thaliana]
           gi|7267447|emb|CAB81144.1| AT4g08070 [Arabidopsis
           thaliana]
          Length = 767

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/110 (60%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   DCCLFTDE--KIE-CPKCKSSRWFVDEKTNKIKEGVPAKVLRYFPIIPRFKRMFQLPELA 171
           DCCLF  +  K++ CPKC +SRW  +  T ++K+GVP KVLRYFPIIPR KRMF+  E+A
Sbjct: 231 DCCLFRKKYKKLQNCPKCNASRWKTNMHTGEVKKGVPQKVLRYFPIIPRLKRMFRSEEMA 290

Query: 172 EQLRWHHNNKSTDGNMRHPVDSEAWQEIDKKWPLFSAEPRNLRLGLAADG 321
             LRWH +NKSTDG +RHPVDS  W +++ K+PLF++E RNLRLGL+ DG
Sbjct: 291 RDLRWHFHNKSTDGKLRHPVDSVTWDQMNAKYPLFASEERNLRLGLSTDG 340


>gb|AAC97237.1| putative TNP2-like transposon protein [Arabidopsis thaliana]
          Length = 889

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/110 (60%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   DCCLFTD--EKIE-CPKCKSSRWFVDEKTNKIKEGVPAKVLRYFPIIPRFKRMFQLPELA 171
           DCCLF    + +E CPKC +SRW  + +T + K+GVP KVLRYFPIIPRFKRMF+  E+A
Sbjct: 210 DCCLFRKRYKNLENCPKCNASRWKSNMQTGEAKKGVPQKVLRYFPIIPRFKRMFRSEEMA 269

Query: 172 EQLRWHHNNKSTDGNMRHPVDSEAWQEIDKKWPLFSAEPRNLRLGLAADG 321
           + LRWH++NKSTDG +RHPVDS  W +++ K+P F+ E RNLRLGL+ DG
Sbjct: 270 KDLRWHYSNKSTDGKLRHPVDSVTWDKMNDKYPEFAIEERNLRLGLSTDG 319


>gb|AAG51463.1|AC069160_9 CACTA-element transposase, putative [Arabidopsis thaliana]
          Length = 557

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/110 (60%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   DCCLFTD--EKIE-CPKCKSSRWFVDEKTNKIKEGVPAKVLRYFPIIPRFKRMFQLPELA 171
           DCCLF    + +E CPKC +SRW  + +T + K+GVP KVLRYFPIIPRFKRMF+  E+A
Sbjct: 35  DCCLFRKRYKNLENCPKCNASRWKSNMQTGEAKKGVPQKVLRYFPIIPRFKRMFRSEEMA 94

Query: 172 EQLRWHHNNKSTDGNMRHPVDSEAWQEIDKKWPLFSAEPRNLRLGLAADG 321
           + LRWH++NKS DG +RHPVDS  W +++ K+P F+AE RNLRLGL+ DG
Sbjct: 95  KDLRWHYSNKSIDGKLRHPVDSVTWDKMNDKYPEFAAEERNLRLGLSTDG 144


>gb|AAG26076.1|AC069299_2 En/Spm-like transposon protein, putative [Arabidopsis thaliana]
          Length = 428

 Score =  140 bits (352), Expect = 1e-31
 Identities = 64/110 (58%), Positives = 81/110 (73%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   DCCLFTDE---KIECPKCKSSRWFVDEKTNKIKEGVPAKVLRYFPIIPRFKRMFQLPELA 171
           DC L+  E   +  CP+C + RW  D+ T + K+G+PAKVLRYFPI  RFKRMF+  ++A
Sbjct: 225 DCILYRKEYELRDTCPRCSAFRWERDKHTGEEKKGIPAKVLRYFPIKDRFKRMFRSKKMA 284

Query: 172 EQLRWHHNNKSTDGNMRHPVDSEAWQEIDKKWPLFSAEPRNLRLGLAADG 321
           E LRWH +N S DG MRHPVDS AW +++ KWP F+AEPRNLRLGL+ DG
Sbjct: 285 EDLRWHFSNASDDGTMRHPVDSLAWAQVNYKWPQFAAEPRNLRLGLSTDG 334


>dbj|BAB03186.1| En/Spm transposon protein-like [Arabidopsis thaliana]
          Length = 1516

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/110 (57%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   DCCLFTDE---KIECPKCKSSRWFVDEKTNKIKEGVPAKVLRYFPIIPRFKRMFQLPELA 171
           DC L+  E   +  CP+C +SRW  D+ T + K+G+PAKVL YFPI  RFKRMF+  ++A
Sbjct: 218 DCILYRKEYELRDTCPRCNASRWERDKHTGEEKKGIPAKVLGYFPIKDRFKRMFRSKKMA 277

Query: 172 EQLRWHHNNKSTDGNMRHPVDSEAWQEIDKKWPLFSAEPRNLRLGLAADG 321
           E  RWH +N S DG MRH VDS AW +++ KWP F+AEPRNLRLGL+ADG
Sbjct: 278 EDQRWHFSNASDDGTMRHHVDSLAWAQVNDKWPEFAAEPRNLRLGLSADG 327


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